Chlorine in PDB 6fqq: Crystal Structure of Tale Homeobox Domain Transcription Factor TGIF1 Double Alanine Mutant Bound to Its Consensus Dna

Protein crystallography data

The structure of Crystal Structure of Tale Homeobox Domain Transcription Factor TGIF1 Double Alanine Mutant Bound to Its Consensus Dna, PDB code: 6fqq was solved by E.Guca, M.J.Macias, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.11 / 3.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.058, 93.016, 100.711, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 27.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Tale Homeobox Domain Transcription Factor TGIF1 Double Alanine Mutant Bound to Its Consensus Dna (pdb code 6fqq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Tale Homeobox Domain Transcription Factor TGIF1 Double Alanine Mutant Bound to Its Consensus Dna, PDB code: 6fqq:

Chlorine binding site 1 out of 1 in 6fqq

Go back to Chlorine Binding Sites List in 6fqq
Chlorine binding site 1 out of 1 in the Crystal Structure of Tale Homeobox Domain Transcription Factor TGIF1 Double Alanine Mutant Bound to Its Consensus Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Tale Homeobox Domain Transcription Factor TGIF1 Double Alanine Mutant Bound to Its Consensus Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:78.1
occ:1.00
NE2 A:GLN177 3.3 74.9 1.0
OD1 A:ASP181 3.7 72.4 1.0
CB A:ARG180 4.4 55.8 1.0
O A:ARG180 4.4 60.1 1.0
CE A:MET226 4.5 45.5 1.0
CD A:GLN177 4.6 75.9 1.0
C A:ARG180 4.6 57.5 1.0
CB A:TYR184 4.8 57.3 1.0
CD A:ARG180 4.8 50.1 1.0
CG A:ASP181 4.9 68.1 1.0
N A:ASP181 4.9 52.6 1.0
CA A:ASP181 5.0 60.1 1.0

Reference:

E.Guca, D.Sunol, L.Ruiz, A.Konkol, J.Cordero, C.Torner, E.Aragon, P.Martin-Malpartida, A.Riera, M.J.Macias. TGIF1 Homeodomain Interacts with Smad MH1 Domain and Represses Tgf-Beta Signaling. Nucleic Acids Res. V. 46 9220 2018.
ISSN: ESSN 1362-4962
PubMed: 30060237
DOI: 10.1093/NAR/GKY680
Page generated: Sat Dec 12 12:59:43 2020

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