Chlorine in PDB 6frq: Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.

Enzymatic activity of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.

All present enzymatic activity of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.:
3.2.1.17;

Protein crystallography data

The structure of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate., PDB code: 6frq was solved by S.Engilberge, F.Riobe, S.Di Pietro, T.Wagner, S.Shima, E.Girard, E.Dumont, O.Maury, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.85 / 1.69
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.700, 77.700, 38.377, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 23.9

Other elements in 6frq:

The structure of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. also contains other interesting chemical elements:

Terbium (Tb) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. (pdb code 6frq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate., PDB code: 6frq:

Chlorine binding site 1 out of 1 in 6frq

Go back to Chlorine Binding Sites List in 6frq
Chlorine binding site 1 out of 1 in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:35.4
occ:1.00
H A:GLY26 2.1 28.9 1.0
HG A:SER24 2.2 29.3 1.0
HA A:GLN121 2.8 29.6 1.0
HB2 A:SER24 2.8 28.7 1.0
HA3 A:GLY26 2.9 28.5 1.0
N A:GLY26 3.0 27.3 1.0
OG A:SER24 3.1 30.5 1.0
HG2 A:GLN121 3.3 45.1 1.0
HG23 A:VAL120 3.4 35.9 1.0
HG12 A:ILE124 3.4 34.1 1.0
CB A:SER24 3.5 28.9 1.0
CA A:GLY26 3.5 27.7 1.0
HD11 A:ILE124 3.6 45.0 1.0
HD13 A:ILE124 3.6 43.6 1.0
CA A:GLN121 3.7 31.6 1.0
HB2 A:GLN121 3.7 33.8 1.0
H A:LEU25 3.9 24.6 1.0
CD1 A:ILE124 4.0 44.6 1.0
HB3 A:LEU25 4.0 26.9 1.0
N A:LEU25 4.0 26.7 1.0
CB A:GLN121 4.0 34.8 1.0
N A:GLN121 4.1 31.2 1.0
CG A:GLN121 4.1 45.4 1.0
HA2 A:GLY26 4.2 26.9 1.0
H A:ASN27 4.2 23.8 1.0
C A:LEU25 4.2 26.7 1.0
HB3 A:SER24 4.2 29.6 1.0
CG1 A:ILE124 4.2 35.1 1.0
C A:SER24 4.2 30.1 1.0
C A:VAL120 4.4 35.7 1.0
CG2 A:VAL120 4.4 36.3 1.0
O A:VAL120 4.4 34.4 1.0
CA A:SER24 4.5 27.1 1.0
CA A:LEU25 4.5 25.8 1.0
H A:GLN121 4.5 31.2 1.0
HG21 A:VAL120 4.6 36.2 1.0
HG3 A:GLN121 4.6 45.9 1.0
C A:GLY26 4.6 28.4 1.0
O A:SER24 4.7 29.7 1.0
N A:ASN27 4.7 23.7 1.0
HG13 A:ILE124 4.7 35.6 1.0
CB A:LEU25 4.8 26.6 1.0
HG23 A:ILE124 4.8 34.7 1.0
C A:GLN121 4.9 32.5 1.0
HD22 A:ASN27 4.9 28.9 1.0
HB A:VAL120 4.9 35.2 1.0
O A:HOH346 4.9 32.1 1.0
HG21 A:ILE124 5.0 35.5 1.0

Reference:

S.Engilberge, F.Riobe, T.Wagner, S.Di Pietro, C.Breyton, B.Franzetti, S.Shima, E.Girard, E.Dumont, O.Maury. Unveiling the Binding Modes of the Crystallophore, A Terbium-Based Nucleating and Phasing Molecular Agent For Protein Crystallography. Chemistry V. 24 9739 2018.
ISSN: ISSN 1521-3765
PubMed: 29806881
DOI: 10.1002/CHEM.201802172
Page generated: Sat Dec 12 12:59:44 2020

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