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Chlorine in PDB 6fu7: Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp

Enzymatic activity of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp

All present enzymatic activity of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp:
2.4.2.17;

Protein crystallography data

The structure of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp, PDB code: 6fu7 was solved by M.S.Alphey, Y.Ge, G.Fisher, C.M.Czekster, J.H.Naismith, R.G.Da Silva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 73.39 / 2.31
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.820, 146.780, 94.460, 90.00, 101.77, 90.00
R / Rfree (%) 21.2 / 24.3

Other elements in 6fu7:

The structure of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp (pdb code 6fu7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp, PDB code: 6fu7:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6fu7

Go back to Chlorine Binding Sites List in 6fu7
Chlorine binding site 1 out of 3 in the Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:57.6
occ:1.00
 NE2 B:GLN118 3.5 49.7 1.0
N B:ASP310 3.8 41.5 1.0
CB B:PRO116 3.9 42.8 1.0
C B:MET309 3.9 43.5 1.0
CB B:ASP310 4.0 42.6 1.0
CG B:GLN118 4.1 42.2 1.0
CA B:ASP310 4.1 41.3 1.0
CG B:PRO116 4.1 43.5 1.0
O B:MET309 4.1 41.5 1.0
CB B:GLN118 4.2 40.1 1.0
CD B:GLN118 4.3 42.9 1.0
CA B:GLN118 4.4 39.9 1.0
CA B:MET309 4.6 44.6 1.0
CG B:ASP310 4.9 45.1 1.0
N B:MET309 4.9 42.8 1.0
OG B:SER308 4.9 46.6 1.0

Chlorine binding site 2 out of 3 in 6fu7

Go back to Chlorine Binding Sites List in 6fu7
Chlorine binding site 2 out of 3 in the Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:93.2
occ:1.00
 N C:ALA191 3.3 0.4 1.0
NH1 C:ARG185 3.6 0.2 1.0
CA C:GLU190 3.8 0.5 1.0
C C:GLU190 4.0 0.2 1.0
CB C:GLU190 4.0 0.1 1.0
CB C:ALA191 4.1 0.6 1.0
CA C:ALA191 4.2 0.1 1.0
CG C:ARG185 4.6 0.1 1.0
O C:ALA191 4.7 0.6 1.0
CD C:ARG185 4.8 0.3 1.0
CZ C:ARG185 4.9 0.0 1.0
O C:LEU189 4.9 0.5 1.0
C C:ALA191 5.0 0.9 1.0

Chlorine binding site 3 out of 3 in 6fu7

Go back to Chlorine Binding Sites List in 6fu7
Chlorine binding site 3 out of 3 in the Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Atp Phosphoribosyltransferase (Hiszg Atpprt) From Psychrobacter Arcticus in Complex with Pratp within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl302

b:87.2
occ:1.00
 N D:ALA191 3.4 92.6 1.0
CA D:GLU190 3.8 93.8 1.0
NE D:ARG185 3.9 0.1 1.0
CB D:GLU190 4.1 96.0 1.0
C D:GLU190 4.1 92.0 1.0
CB D:ALA191 4.2 92.1 1.0
CA D:ALA191 4.4 92.3 1.0
CG D:ARG185 4.5 97.0 1.0
NH2 D:ARG185 4.5 98.4 1.0
CD D:ARG185 4.6 0.1 1.0
CZ D:ARG185 4.6 99.9 1.0
O D:LEU189 4.8 94.2 1.0
O D:ALA191 4.9 95.9 1.0

Reference:

M.S.Alphey, G.Fisher, J.S.Hirschi, R.Stroek, Y.Ge, E.R.Gould, C.M.Czekster, H.Liu, G.J.Florence, M.J.Vetticatt, J.H.Naismith, R.G.Da Silva. Catalytic and Anticatalytic Snapshots of A Short-Form Atp Phosphoribosyltransferase Acs Catalysis 2018.
ISSN: ESSN 2155-5435
DOI: 10.1021/ACSCATAL.8B00867
Page generated: Sat Jul 27 23:34:05 2024

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