Chlorine in PDB 6fxp: Crystal Structure of S. Aureus Glucosaminidase B

The structure of Crystal Structure of S. Aureus Glucosaminidase B, PDB code: 6fxp was solved by S.Pintar, D.Turk, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.95 / 2.03
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	151.770, 151.770, 122.510, 90.00, 90.00, 120.00
R / Rfree (%)	21.2 / 22

The structure of Crystal Structure of S. Aureus Glucosaminidase B also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the Crystal Structure of S. Aureus Glucosaminidase B (pdb code 6fxp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of S. Aureus Glucosaminidase B, PDB code: 6fxp:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of S. Aureus Glucosaminidase B


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of S. Aureus Glucosaminidase B within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:26.6 occ:1.00 H A:ASN191 2.1 2.0 0.0 HZ2 A:LYS237 2.2 2.0 0.0 H1 A:HOH425 2.3 2.0 0.0 HG A:SER195 2.9 2.0 0.0 OG A:SER195 2.9 21.3 1.0 N A:ASN191 3.1 22.9 1.0 NZ A:LYS237 3.1 45.3 1.0 H A:THR192 3.1 2.0 0.0 O A:HOH425 3.2 48.2 1.0 HZ1 A:LYS237 3.3 2.0 0.0 H2 A:HOH425 3.3 2.0 0.0 CD A:LYS237 3.4 34.9 1.0 CE A:LYS237 3.6 44.2 1.0 C A:ASP189 3.6 25.1 1.0 O A:ASP189 3.7 22.7 1.0 N A:THR192 3.7 22.3 1.0 CZ A:PHE239 3.7 24.1 1.0 CB A:ASN191 3.8 25.0 1.0 CA A:ASN191 3.8 24.4 1.0 N A:GLN190 3.8 22.1 1.0 CB A:SER195 3.9 23.4 1.0 HZ3 A:LYS237 3.9 2.0 0.0 O A:THR188 3.9 25.3 1.0 CG2 A:THR192 3.9 21.6 1.0 C A:ASN191 4.0 25.6 1.0 CE1 A:PHE239 4.0 24.1 1.0 CA A:GLN190 4.0 25.6 1.0 C A:GLN190 4.1 24.5 1.0 H A:GLN190 4.2 2.0 0.0 OG1 A:THR192 4.2 22.7 1.0 CA A:ASP189 4.3 22.1 1.0 HD22 A:ASN191 4.5 2.0 0.0 HG1 A:THR192 4.5 2.0 0.0 CB A:THR192 4.5 25.3 1.0 CG A:ASN191 4.6 32.4 1.0 CG A:LYS237 4.7 25.5 1.0 CA A:THR192 4.7 23.5 1.0 C A:THR188 4.7 26.5 1.0 O A:ASN191 4.8 24.6 1.0 ND2 A:ASN191 4.8 26.2 1.0 CE2 A:PHE239 4.9 28.1 1.0 H2 A:HOH449 5.0 2.0 0.0 N A:ASP189 5.0 23.1 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of S. Aureus Glucosaminidase B


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of S. Aureus Glucosaminidase B within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl602 b:24.8 occ:1.00 HZ2 B:LYS488 2.1 2.0 0.0 H B:ASN442 2.1 2.0 0.0 OG B:SER446 2.9 22.7 1.0 NZ B:LYS488 3.0 44.5 1.0 N B:ASN442 3.0 23.0 1.0 HG B:SER446 3.2 2.0 0.0 H B:THR443 3.3 2.0 0.0 HZ1 B:LYS488 3.4 2.0 0.0 CD B:LYS488 3.4 46.3 1.0 CE B:LYS488 3.5 56.3 1.0 C B:ASP440 3.5 25.1 1.0 O B:ASP440 3.5 24.4 1.0 CZ B:PHE490 3.6 25.1 1.0 N B:GLN441 3.7 21.4 1.0 CB B:ASN442 3.7 24.3 1.0 HZ3 B:LYS488 3.8 2.0 0.0 CA B:ASN442 3.8 24.2 1.0 O B:HOH722 3.8 44.6 1.0 CB B:SER446 3.9 22.8 1.0 N B:THR443 3.9 21.5 1.0 CA B:GLN441 3.9 24.2 1.0 H1 B:HOH722 4.0 2.0 0.0 C B:GLN441 4.0 25.2 1.0 O B:THR439 4.0 25.0 1.0 CE1 B:PHE490 4.0 24.2 1.0 CG2 B:THR443 4.1 23.4 1.0 CA B:ASP440 4.1 22.8 1.0 C B:ASN442 4.1 24.6 1.0 H B:GLN441 4.2 2.0 0.0 OG1 B:THR443 4.4 21.9 1.0 HG1 B:THR443 4.5 2.0 0.0 CG B:ASN442 4.6 31.8 1.0 H2 B:HOH722 4.6 2.0 0.0 CB B:THR443 4.6 22.5 1.0 CG B:LYS488 4.7 34.3 1.0 C B:THR439 4.7 25.7 1.0 N B:ASP440 4.8 22.8 1.0 CE2 B:PHE490 4.8 24.9 1.0 OD1 B:ASN442 4.8 40.8 1.0 CA B:THR443 4.9 22.3 1.0 H1 B:HOH740 4.9 2.0 0.0 CB B:LYS488 5.0 24.4 1.0

S.Pintar, D.Turk. Crystal Structure of S. Aureus Glucosaminidase B To Be Published.