Atomistry » Chlorine » PDB 6g1v-6g8l » 6g20
Atomistry »
  Chlorine »
    PDB 6g1v-6g8l »
      6g20 »

Chlorine in PDB 6g20: Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State.

Protein crystallography data

The structure of Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State., PDB code: 6g20 was solved by A.Schmidt, L.Sauthof, M.Szczepek, P.Scheerer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 158.58 / 2.16
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 183.114, 183.114, 179.655, 90.00, 90.00, 120.00
R / Rfree (%) 20.9 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State. (pdb code 6g20). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State., PDB code: 6g20:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6g20

Go back to Chlorine Binding Sites List in 6g20
Chlorine binding site 1 out of 2 in the Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl612

b:71.9
occ:1.00
NH1 A:ARG311 3.0 60.1 1.0
NE1 A:TRP272 3.4 34.6 1.0
NZ A:LYS308 3.6 42.6 1.0
CZ2 A:TRP272 4.0 34.4 1.0
CD A:LYS308 4.0 42.6 1.0
CG A:LYS308 4.0 41.4 1.0
CE2 A:TRP272 4.1 34.1 1.0
CZ A:ARG311 4.1 60.0 1.0
CD A:ARG166 4.2 39.8 1.0
CE A:LYS308 4.4 42.6 1.0
NH1 A:ARG166 4.4 41.5 1.0
NH2 A:ARG311 4.4 61.3 1.0
CD1 A:TRP272 4.6 34.6 1.0
CG1 A:VAL142 4.6 38.3 1.0
NE A:ARG166 4.9 40.6 1.0

Chlorine binding site 2 out of 2 in 6g20

Go back to Chlorine Binding Sites List in 6g20
Chlorine binding site 2 out of 2 in the Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Functional Meta-F Intermediate State. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl612

b:65.8
occ:1.00
O B:HOH824 2.9 59.2 1.0
N B:ARG130 3.3 48.1 1.0
CA B:GLY127 3.5 75.1 1.0
C B:GLY127 3.6 67.7 1.0
N B:ALA129 3.7 50.6 1.0
CB B:ARG130 3.8 52.2 1.0
O B:GLY127 3.9 64.4 1.0
CB B:ALA129 3.9 47.9 1.0
N B:THR128 4.0 63.1 1.0
CA B:ALA129 4.1 48.3 1.0
CA B:ARG130 4.1 50.4 1.0
C B:ALA129 4.1 47.9 1.0
N B:GLY127 4.4 81.9 1.0
C B:THR128 4.5 55.1 1.0
O B:HOH822 4.8 61.2 1.0
CA B:THR128 4.8 59.6 1.0
SD B:MET295 5.0 48.7 0.5

Reference:

A.Schmidt, L.Sauthof, M.Szczepek, M.F.Lopez, F.V.Escobar, B.M.Qureshi, N.Michael, D.Buhrke, T.Stevens, D.Kwiatkowski, D.Von Stetten, M.A.Mroginski, N.Krauss, T.Lamparter, P.Hildebrandt, P.Scheerer. Structural Snapshot of A Bacterial Phytochrome in Its Functional Intermediate State. Nat Commun V. 9 4912 2018.
ISSN: ESSN 2041-1723
PubMed: 30464203
DOI: 10.1038/S41467-018-07392-7
Page generated: Sat Jul 27 23:40:38 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy