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Chlorine in PDB 6gb0: The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp

Enzymatic activity of The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp

All present enzymatic activity of The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp:
2.10.1.1; 2.7.7.75;

Protein crystallography data

The structure of The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp, PDB code: 6gb0 was solved by J.Krausze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.06 / 1.81
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 66.470, 123.420, 132.280, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 21.5

Other elements in 6gb0:

The structure of The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp (pdb code 6gb0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp, PDB code: 6gb0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6gb0

Go back to Chlorine Binding Sites List in 6gb0
Chlorine binding site 1 out of 2 in the The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:55.6
occ:1.00
 H A:GLY296 2.5 36.5 0.0
HH12 A:ARG369 2.6 39.7 0.0
HH22 A:ARG369 2.6 58.6 0.0
O A:HOH766 2.7 36.8 1.0
HB3 A:SER400 3.1 27.4 0.0
N A:GLY296 3.5 35.9 1.0
HG A:SER400 3.5 32.4 0.0
NH1 A:ARG369 3.5 40.2 1.0
NH2 A:ARG369 3.5 59.1 1.0
HA2 A:GLY296 3.6 35.7 0.0
HA A:PRO295 3.7 31.8 0.0
H A:SER400 3.7 28.5 0.0
O A:HOH677 3.7 38.9 1.0
OG A:SER400 3.7 32.3 1.0
CB A:SER400 3.9 26.9 1.0
CZ A:ARG369 4.0 65.7 1.0
CA A:GLY296 4.1 35.4 1.0
HH11 A:ARG369 4.3 40.2 0.0
HH21 A:ARG369 4.4 59.9 0.0
CA A:PRO295 4.5 31.1 1.0
C A:PRO295 4.5 37.3 1.0
N A:SER400 4.5 28.0 1.0
HB2 A:SER400 4.7 26.4 0.0
HB2 A:PRO295 4.7 31.2 0.0
HA A:ALA294 4.8 33.3 0.0
O A:GLY296 4.8 40.7 1.0
CA A:SER400 4.9 26.4 1.0
HB3 A:PRO295 4.9 31.9 0.0
HA3 A:GLY296 4.9 35.0 0.0
C A:GLY296 4.9 39.8 1.0
CB A:PRO295 4.9 31.5 1.0
HA A:MET399 5.0 33.7 0.0
HG A:SER328 5.0 32.1 0.0

Chlorine binding site 2 out of 2 in 6gb0

Go back to Chlorine Binding Sites List in 6gb0
Chlorine binding site 2 out of 2 in the The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of Variant K294A of the Mo-Insertase Domain CNX1E From Arabidopsis Thaliana in Complex with Amp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:70.9
occ:1.00
 HA2 A:GLY211 3.6 28.5 0.0
O A:THR209 3.8 30.8 1.0
HG22 A:THR209 3.8 32.6 0.0
N A:GLY211 3.9 27.6 1.0
HA3 A:GLY211 3.9 27.7 0.0
H A:GLY211 3.9 27.1 0.0
CA A:GLY211 4.0 27.8 1.0
O A:HOH636 4.0 34.5 1.0
C A:LEU210 4.3 29.9 1.0
HB A:THR209 4.4 31.3 0.0
O A:HOH830 4.5 50.5 1.0
C A:THR209 4.5 30.7 1.0
O A:HOH719 4.7 50.8 1.0
O A:LEU210 4.7 27.7 1.0
HA A:LEU210 4.7 25.5 0.0
CG2 A:THR209 4.8 32.8 1.0
CA A:LEU210 5.0 25.9 1.0

Reference:

J.Krausze, T.W.Hercher, D.Zwerschke, M.L.Kirk, W.Blankenfeldt, R.R.Mendel, T.Kruse. The Functional Principle of Eukaryotic Molybdenum Insertases. Biochem. J. V. 475 1739 2018.
ISSN: ESSN 1470-8728
PubMed: 29717023
DOI: 10.1042/BCJ20170935
Page generated: Sat Jul 27 23:54:21 2024

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