Chlorine in PDB 6gho: Crystal Structure of Spx in Complex with Yjbh

Protein crystallography data

The structure of Crystal Structure of Spx in Complex with Yjbh, PDB code: 6gho was solved by W.Awad, D.T.Logan, C.Von Wachenfeldt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.67 / 1.79
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.100, 85.340, 109.530, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 22.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Spx in Complex with Yjbh (pdb code 6gho). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Spx in Complex with Yjbh, PDB code: 6gho:

Chlorine binding site 1 out of 1 in 6gho

Go back to Chlorine Binding Sites List in 6gho
Chlorine binding site 1 out of 1 in the Crystal Structure of Spx in Complex with Yjbh


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Spx in Complex with Yjbh within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:73.2
occ:1.00
NH2 B:ARG290 2.8 47.5 1.0
O B:HOH410 3.1 57.4 1.0
O B:HOH469 3.4 52.7 1.0
CD B:ARG290 3.6 54.8 1.0
CG B:ARG290 3.6 49.8 1.0
CB B:LYS247 3.7 39.0 1.0
CZ B:ARG290 3.9 58.9 1.0
O B:LYS247 4.0 37.2 1.0
NE B:ARG290 4.2 53.1 1.0
C B:LYS247 4.4 38.1 1.0
CG B:LYS247 4.5 45.5 1.0
O B:HOH421 4.6 45.9 1.0
O B:HOH564 4.6 58.2 1.0
CA B:LYS247 4.6 38.5 1.0
NZ B:LYS133 4.7 60.4 1.0
CD B:LYS247 4.8 59.4 1.0
CB B:PHE248 5.0 34.4 1.0
O B:TYR291 5.0 41.6 1.0

Reference:

W.Awad, Y.Al-Eryani, S.Ekstrom, D.T.Logan, C.Von Wachenfeldt. Structural Basis For Yjbh Adaptor-Mediated Recognition of Transcription Factor Spx. Structure V. 27 923 2019.
ISSN: ISSN 0969-2126
PubMed: 30982633
DOI: 10.1016/J.STR.2019.03.009
Page generated: Sat Dec 12 13:01:52 2020

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