Chlorine in PDB 6h40: High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol.

Protein crystallography data

The structure of High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol., PDB code: 6h40 was solved by P.J.B.Pereira, J.Ripoll-Rozada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.99 / 1.05
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 113.134, 113.134, 41.107, 90.00, 90.00, 120.00
R / Rfree (%) 10.8 / 12

Other elements in 6h40:

The structure of High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol. also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol. (pdb code 6h40). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol., PDB code: 6h40:

Chlorine binding site 1 out of 1 in 6h40

Go back to Chlorine Binding Sites List in 6h40
Chlorine binding site 1 out of 1 in the High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High Resolution Structure of MET1 From Mycobacterium Hassiacum in Complex with 3-Methoxy-1,2-Propanediol. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl608

b:13.6
occ:1.00
HN62 A:SAH605 2.2 13.5 1.0
H A:ALA125 2.3 12.5 1.0
HB3 A:LYS123 2.7 11.8 1.0
HD2 A:ARG151 3.0 32.1 1.0
HB3 A:ALA125 3.2 16.6 1.0
N6 A:SAH605 3.2 11.2 1.0
N A:ALA125 3.2 10.4 1.0
HE A:ARG151 3.2 32.2 1.0
HB3 A:SER124 3.2 14.3 1.0
NE A:ARG151 3.3 26.9 1.0
HB2 A:ALA125 3.3 16.6 1.0
H A:SER124 3.3 11.1 1.0
N A:SER124 3.6 9.3 1.0
CB A:ALA125 3.6 13.9 1.0
CD A:ARG151 3.6 26.8 1.0
HN61 A:SAH605 3.7 13.5 1.0
CZ A:ARG151 3.7 25.1 1.0
CB A:LYS123 3.7 9.9 1.0
HD3 A:LYS123 3.8 13.1 1.0
CA A:ALA125 4.0 11.4 1.0
C A:LYS123 4.1 9.6 1.0
CB A:SER124 4.1 11.9 1.0
HH21 A:ARG151 4.1 32.7 1.0
NH2 A:ARG151 4.1 27.2 1.0
CA A:SER124 4.1 9.9 1.0
C A:SER124 4.1 9.7 1.0
C6 A:SAH605 4.1 9.3 1.0
N1 A:SAH605 4.2 9.5 1.0
HB2 A:LYS123 4.2 11.8 1.0
HA A:LYS123 4.2 10.7 1.0
H A:VAL126 4.2 12.5 1.0
CA A:LYS123 4.3 8.9 1.0
HD3 A:ARG151 4.3 32.1 1.0
NH1 A:ARG151 4.3 31.8 1.0
HG2 A:ARG151 4.3 25.7 1.0
HH11 A:ARG151 4.4 38.1 1.0
HG2 A:LYS123 4.4 12.3 1.0
CG A:LYS123 4.5 10.3 1.0
HB1 A:ALA125 4.5 16.6 1.0
CD A:LYS123 4.5 10.9 1.0
O A:HOH774 4.5 16.1 1.0
HB2 A:SER124 4.6 14.3 1.0
O A:HOH925 4.6 40.0 1.0
CG A:ARG151 4.6 21.4 1.0
HH22 A:ARG151 4.7 32.7 1.0
HA A:ALA125 4.7 13.7 1.0
HG23 A:VAL126 4.7 13.8 1.0
O A:LYS123 4.8 9.9 1.0
HH12 A:ARG151 4.8 38.1 1.0
N A:VAL126 4.9 10.4 1.0
HD2 A:LYS123 4.9 13.1 1.0
C A:ALA125 5.0 10.9 1.0

Reference:

J.Ripoll-Rozada, M.Costa, J.A.Manso, A.Maranha, V.Miranda, A.Sequeira, M.R.Ventura, S.Macedo-Ribeiro, P.J.B.Pereira, N.Empadinhas. Biosynthesis of Mycobacterial Methylmannose Polysaccharides Requires A Unique 1-O-Methyltransferase Specific For 3-O-Methylated Mannosides. Proc. Natl. Acad. Sci. V. 116 835 2019U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30606802
DOI: 10.1073/PNAS.1813450116
Page generated: Sat Dec 12 13:03:43 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy