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Chlorine in PDB 6hrl: Crystal Structure of the Kelch Domain of Human KLHL17

Protein crystallography data

The structure of Crystal Structure of the Kelch Domain of Human KLHL17, PDB code: 6hrl was solved by Z.Chen, E.Williams, F.J.Sorrell, J.A.Newman, L.Shrestha, N.Burgess-Brown, F.Von Delft, F.Arrowsmith, C.H.Edwards, C.Bountra, A.N.Bullock, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.50 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.353, 118.774, 124.991, 90.00, 90.00, 90.00
R / Rfree (%) 22.7 / 26.9

Other elements in 6hrl:

The structure of Crystal Structure of the Kelch Domain of Human KLHL17 also contains other interesting chemical elements:

Sodium (Na) 4 atoms

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 11;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of the Kelch Domain of Human KLHL17 (pdb code 6hrl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 11 binding sites of Chlorine where determined in the Crystal Structure of the Kelch Domain of Human KLHL17, PDB code: 6hrl:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 11 in 6hrl

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Chlorine binding site 1 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl705

b:84.5
occ:1.00
NE A:ARG517 3.6 45.8 1.0
NH2 A:ARG517 3.9 46.9 1.0
CZ A:ARG517 4.3 45.8 1.0
O A:HOH901 4.4 44.0 1.0
CD A:ARG517 4.6 44.8 1.0

Chlorine binding site 2 out of 11 in 6hrl

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Chlorine binding site 2 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl706

b:84.6
occ:1.00
NH2 A:ARG598 2.8 45.1 1.0
NE1 A:TRP576 3.1 49.3 1.0
CZ A:ARG598 3.9 45.4 1.0
CD1 A:TRP576 4.0 49.2 1.0
CE2 A:TRP576 4.2 48.4 1.0
NH1 A:ARG598 4.4 45.8 1.0
O A:ASP574 4.5 50.6 1.0
CZ2 A:TRP576 4.5 48.0 1.0
OD2 A:ASP574 4.9 55.1 1.0
NE A:ARG598 4.9 45.3 1.0

Chlorine binding site 3 out of 11 in 6hrl

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Chlorine binding site 3 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl707

b:90.5
occ:1.00
NH1 A:ARG611 3.3 53.6 1.0
NH2 A:ARG611 3.4 54.5 1.0
O A:HOH812 3.7 26.9 1.0
CZ A:ARG611 3.8 54.3 1.0
O A:HOH805 4.3 49.9 1.0
O A:HOH810 4.5 45.2 1.0
N B:GLY337 4.6 30.1 1.0
OG A:SER587 4.7 56.5 1.0
CD1 B:LEU623 4.8 62.5 1.0

Chlorine binding site 4 out of 11 in 6hrl

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Chlorine binding site 4 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl708

b:61.7
occ:1.00
O A:HOH898 2.3 69.3 1.0
N A:HIS494 3.5 46.4 1.0
CA A:SER493 3.9 48.2 1.0
CD2 A:HIS494 3.9 47.6 1.0
CB A:SER493 4.2 48.4 1.0
C A:SER493 4.2 47.3 1.0
CB A:HIS494 4.4 45.2 1.0
CA A:HIS494 4.5 45.1 1.0
CG A:HIS494 4.5 46.4 1.0
O A:SER492 4.5 49.1 1.0
OG A:SER493 4.6 49.9 1.0
O A:HIS494 4.7 45.2 1.0
NH1 A:ARG517 4.7 44.6 1.0
CD A:ARG517 4.8 44.8 1.0
CZ A:ARG517 4.9 45.8 1.0
NE A:ARG517 4.9 45.8 1.0
O A:ASP537 5.0 48.8 1.0

Chlorine binding site 5 out of 11 in 6hrl

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Chlorine binding site 5 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl709

b:76.7
occ:1.00
O A:HOH867 2.8 48.9 1.0
N A:ASP480 3.1 43.2 1.0
CA A:ASP480 3.8 44.2 1.0
C A:LEU479 4.0 41.7 1.0
OD1 A:ASP480 4.0 45.4 1.0
CA A:LEU479 4.1 40.1 1.0
CD1 A:LEU479 4.4 39.6 1.0
N A:GLY481 4.5 43.5 1.0
O A:THR478 4.5 37.8 1.0
C A:ASP480 4.7 45.2 1.0
CG A:ASP480 4.7 45.1 1.0
N A:LEU479 4.8 39.3 1.0
CB A:ASP480 4.9 44.7 1.0
C A:THR478 4.9 37.7 1.0

Chlorine binding site 6 out of 11 in 6hrl

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Chlorine binding site 6 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl710

b:62.9
occ:1.00
O A:HOH880 3.1 35.5 1.0
N A:VAL525 3.5 37.0 1.0
CA A:ALA524 3.7 36.4 1.0
CB A:ALA524 3.7 38.0 1.0
C A:ALA524 4.2 35.8 1.0
N A:ALA572 4.2 35.9 1.0
O A:VAL525 4.3 38.6 1.0
CB A:ALA572 4.5 38.8 1.0
O A:HOH830 4.5 59.1 1.0
CA A:VAL525 4.6 36.8 1.0
CB A:VAL525 4.7 36.3 1.0
CA A:VAL571 4.8 34.8 1.0
O A:VAL523 4.8 36.2 1.0
CG2 A:VAL571 4.9 36.9 1.0
C A:VAL525 4.9 37.8 1.0
C A:VAL571 5.0 35.8 1.0
O A:LEU570 5.0 34.2 1.0

Chlorine binding site 7 out of 11 in 6hrl

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Chlorine binding site 7 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl711

b:63.0
occ:1.00
O A:PRO409 3.5 44.1 1.0
OH A:TYR407 3.7 40.9 1.0
CB A:ASN412 4.3 42.3 1.0
OD1 A:ASN412 4.4 41.6 1.0
C A:PRO409 4.4 43.9 1.0
CG A:ASN412 4.5 42.0 1.0
CA A:PRO409 4.6 42.7 1.0
CB A:PRO409 4.8 42.5 1.0
CA A:ASN412 4.8 42.4 1.0
CZ A:TYR407 4.8 40.2 1.0
CG1 A:VAL370 4.9 42.0 1.0

Chlorine binding site 8 out of 11 in 6hrl

Go back to Chlorine Binding Sites List in 6hrl
Chlorine binding site 8 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl712

b:35.0
occ:1.00
OG A:SER614 3.3 49.4 1.0
OG A:SER520 3.3 44.1 1.0
NH1 A:ARG475 3.8 41.4 1.0
NH2 A:ARG475 3.8 41.0 1.0
CB A:SER614 4.1 49.3 1.0
CD1 A:TYR473 4.1 43.6 1.0
CB A:SER520 4.3 43.9 1.0
CZ A:ARG475 4.3 40.7 1.0
CB A:THR567 4.3 48.6 1.0
CG2 A:THR567 4.4 50.1 1.0
CA A:CYS426 4.5 41.4 1.0
CA A:THR567 4.5 46.7 1.0
CA A:SER614 4.5 48.9 1.0
CB A:ARG379 4.5 42.4 1.0
CG A:ARG379 4.6 43.1 1.0
CA A:ARG379 4.6 41.7 1.0
CB A:CYS426 4.7 42.2 1.0
CA A:SER520 4.7 41.7 1.0
CE1 A:TYR473 4.9 44.5 1.0
SG A:CYS426 4.9 43.1 1.0
CA A:TYR473 4.9 41.2 1.0
CB A:TYR473 5.0 41.7 1.0

Chlorine binding site 9 out of 11 in 6hrl

Go back to Chlorine Binding Sites List in 6hrl
Chlorine binding site 9 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl705

b:50.6
occ:1.00
OG B:SER520 3.5 51.8 1.0
NH2 B:ARG475 3.7 44.2 1.0
OG B:SER614 3.8 45.3 1.0
NH1 B:ARG475 3.9 44.7 1.0
CD1 B:TYR473 4.2 45.3 1.0
CB B:THR567 4.2 33.7 1.0
CG2 B:THR567 4.2 33.6 1.0
CZ B:ARG475 4.3 44.3 1.0
CB B:SER520 4.3 48.4 1.0
CB B:ARG379 4.3 42.1 1.0
CG B:ARG379 4.4 43.5 1.0
CB B:SER614 4.4 43.7 1.0
CA B:ARG379 4.4 41.1 1.0
CA B:THR567 4.4 33.2 1.0
CA B:CYS426 4.5 43.1 1.0
CA B:SER614 4.7 43.7 1.0
CB B:CYS426 4.7 43.3 1.0
CA B:SER520 4.8 46.0 1.0
SG B:CYS426 4.8 43.6 1.0
CB B:TYR473 4.9 41.6 1.0
CA B:TYR473 4.9 42.6 1.0
CE1 B:TYR473 4.9 46.5 1.0

Chlorine binding site 10 out of 11 in 6hrl

Go back to Chlorine Binding Sites List in 6hrl
Chlorine binding site 10 out of 11 in the Crystal Structure of the Kelch Domain of Human KLHL17


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of the Kelch Domain of Human KLHL17 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl706

b:72.4
occ:1.00
N B:HIS494 3.1 42.1 1.0
CD2 B:HIS494 3.8 45.2 1.0
CB B:HIS494 3.8 41.4 1.0
CA B:SER493 3.9 44.0 1.0
CA B:HIS494 4.0 40.8 1.0
C B:SER493 4.0 42.7 1.0
O B:HIS494 4.1 39.2 1.0
CG B:HIS494 4.2 43.2 1.0
CB B:SER493 4.2 43.6 1.0
O B:HOH806 4.3 38.6 1.0
CD B:ARG517 4.4 41.9 1.0
O B:ASP537 4.4 45.9 1.0
C B:HIS494 4.5 39.3 1.0
NH1 B:ARG517 4.6 42.4 1.0
OG B:SER493 4.8 44.9 1.0
O B:SER492 4.9 45.1 1.0
NE B:ARG517 4.9 42.4 1.0
CZ B:ARG517 5.0 42.6 1.0
CA B:GLY538 5.0 49.4 1.0

Reference:

Z.Chen, E.Williams, F.J.Sorrell, J.A.Newman, L.Shrestha, N.Burgess-Brown, F.Von Delft, F.Arrowsmith, C.H.Edwards, C.Bountra, A.N.Bullock. Crystal Structure of the Kelch Domain of Human KLHL17 To Be Published.
Page generated: Sun Jul 28 01:04:31 2024

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