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Chlorine in PDB 6hvm: Structural Characterization of Cdaa-Apo

Enzymatic activity of Structural Characterization of Cdaa-Apo

All present enzymatic activity of Structural Characterization of Cdaa-Apo:
2.7.7.85;

Protein crystallography data

The structure of Structural Characterization of Cdaa-Apo, PDB code: 6hvm was solved by J.L.Heidemann, P.Neumann, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.89 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.486, 64.896, 129.809, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 22.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Characterization of Cdaa-Apo (pdb code 6hvm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structural Characterization of Cdaa-Apo, PDB code: 6hvm:

Chlorine binding site 1 out of 1 in 6hvm

Go back to Chlorine Binding Sites List in 6hvm
Chlorine binding site 1 out of 1 in the Structural Characterization of Cdaa-Apo


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Characterization of Cdaa-Apo within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:51.5
occ:1.00
O A:HOH367 3.1 58.5 1.0
N A:ARG4 3.2 44.8 1.0
CG A:ARG4 3.3 52.0 1.0
NH1 A:ARG4 3.5 56.0 1.0
CA A:SER3 3.7 70.2 1.0
CB A:SER3 3.8 78.6 1.0
CB A:ARG4 3.9 49.0 1.0
C A:SER3 3.9 53.6 1.0
CB A:ARG7 4.0 34.4 1.0
CD A:ARG4 4.0 61.5 1.0
CA A:ARG4 4.1 43.0 1.0
CG A:ARG7 4.1 50.5 1.0
O A:ARG4 4.4 37.0 1.0
CZ A:ARG4 4.4 65.3 1.0
NE A:ARG4 4.6 69.4 1.0
CD A:ARG7 4.7 53.4 1.0
C A:ARG4 4.8 38.4 1.0
O A:GLY2 4.9 80.6 1.0

Reference:

J.L.Heidemann, P.Neumann, A.Dickmanns, R.Ficner. Crystal Structures of the C-Di-Amp-Synthesizing Enzyme Cdaa. J.Biol.Chem. V. 294 10463 2019.
ISSN: ESSN 1083-351X
PubMed: 31118276
DOI: 10.1074/JBC.RA119.009246
Page generated: Sun Jul 28 01:16:28 2024

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