Atomistry » Chlorine » PDB 6i6p-6in0 » 6iil
Atomistry »
  Chlorine »
    PDB 6i6p-6in0 »
      6iil »

Chlorine in PDB 6iil: USP14 Catalytic Domain Bind to IU1-47

Enzymatic activity of USP14 Catalytic Domain Bind to IU1-47

All present enzymatic activity of USP14 Catalytic Domain Bind to IU1-47:
3.4.19.12;

Protein crystallography data

The structure of USP14 Catalytic Domain Bind to IU1-47, PDB code: 6iil was solved by Z.Q.Mei, Y.W.Wang, F.Wang, J.W.Wang, W.He, S.Ding, J.W.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.427, 81.404, 108.161, 90.00, 94.62, 90.00
R / Rfree (%) 18.8 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the USP14 Catalytic Domain Bind to IU1-47 (pdb code 6iil). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the USP14 Catalytic Domain Bind to IU1-47, PDB code: 6iil:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6iil

Go back to Chlorine Binding Sites List in 6iil
Chlorine binding site 1 out of 2 in the USP14 Catalytic Domain Bind to IU1-47


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of USP14 Catalytic Domain Bind to IU1-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:32.5
occ:1.00
CL1 A:A8F501 0.0 32.5 1.0
C2 A:A8F501 1.8 31.2 1.0
C3 A:A8F501 2.7 43.1 1.0
C1 A:A8F501 2.7 21.3 1.0
CE A:LYS342 3.4 37.5 1.0
CB A:HIS426 3.8 12.8 1.0
ND1 A:HIS426 3.9 17.9 1.0
CG A:HIS426 4.0 14.2 1.0
C4 A:A8F501 4.0 42.9 1.0
C6 A:A8F501 4.0 23.2 1.0
CD1 A:TYR476 4.0 27.8 1.0
CD A:LYS342 4.1 36.0 1.0
CG A:LYS342 4.1 37.9 1.0
CD A:ARG330 4.2 38.3 1.0
NZ A:LYS342 4.2 31.9 1.0
CB A:ARG330 4.2 47.2 1.0
CE1 A:TYR476 4.5 32.2 1.0
CG A:TYR476 4.5 18.0 1.0
C5 A:A8F501 4.6 33.2 1.0
CE1 A:HIS426 4.7 19.5 1.0
CB A:TYR476 4.8 10.8 1.0
CG A:ARG330 4.8 47.0 1.0
CD2 A:HIS426 4.9 17.9 1.0

Chlorine binding site 2 out of 2 in 6iil

Go back to Chlorine Binding Sites List in 6iil
Chlorine binding site 2 out of 2 in the USP14 Catalytic Domain Bind to IU1-47


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of USP14 Catalytic Domain Bind to IU1-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:68.9
occ:1.00
CL1 B:A8F501 0.0 68.9 1.0
C2 B:A8F501 1.8 67.9 1.0
C1 B:A8F501 2.8 67.0 1.0
C3 B:A8F501 2.8 69.3 1.0
ND1 B:HIS426 3.8 49.2 1.0
CD1 B:TYR476 3.8 46.0 1.0
CE B:LYS342 3.9 72.2 1.0
CB B:HIS426 3.9 38.2 1.0
CD B:LYS342 4.0 74.3 1.0
C6 B:A8F501 4.1 68.9 1.0
C4 B:A8F501 4.1 71.0 1.0
CG B:HIS426 4.1 49.1 1.0
CG B:LYS342 4.1 77.2 1.0
CG B:TYR476 4.2 36.1 1.0
CE1 B:TYR476 4.3 41.4 1.0
CG B:ARG330 4.3 68.7 1.0
CD B:ARG330 4.4 63.2 1.0
CB B:TYR476 4.5 35.0 1.0
C5 B:A8F501 4.6 70.4 1.0
CE1 B:HIS426 4.7 50.3 1.0
O B:ARG330 4.7 87.4 1.0
NZ B:LYS342 4.8 74.8 1.0
CD2 B:TYR476 4.9 36.3 1.0
CZ B:TYR476 5.0 44.0 1.0

Reference:

Y.Wang, Y.Jiang, S.Ding, J.Li, N.Song, Y.Ren, D.Hong, C.Wu, B.Li, F.Wang, W.He, J.Wang, Z.Mei. Small Molecule Inhibitors Reveal Allosteric Regulation of USP14 Via Steric Blockade. Cell Res. V. 28 1186 2018.
ISSN: ISSN 1748-7838
PubMed: 30254335
DOI: 10.1038/S41422-018-0091-X
Page generated: Sun Jul 28 01:41:37 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy