Atomistry » Chlorine » PDB 6in0-6izf » 6ivv
Atomistry »
  Chlorine »
    PDB 6in0-6izf »
      6ivv »

Chlorine in PDB 6ivv: Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution

Enzymatic activity of Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution

All present enzymatic activity of Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution:
3.1.1.29;

Protein crystallography data

The structure of Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution, PDB code: 6ivv was solved by V.Viswanathan, P.Sharma, A.Chaudhary, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.77 / 1.26
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 33.945, 66.034, 75.711, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 18.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution (pdb code 6ivv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution, PDB code: 6ivv:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6ivv

Go back to Chlorine Binding Sites List in 6ivv
Chlorine binding site 1 out of 3 in the Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:17.1
occ:0.90
 O A:HOH422 3.1 19.0 1.0
ND2 A:ASN12 3.3 11.5 1.0
ND2 A:ASN116 3.4 21.1 1.0
CD2 A:HIS22 3.4 10.5 1.0
O A:HOH495 3.5 41.2 1.0
CB A:MET69 3.6 10.8 1.0
NE2 A:HIS22 3.7 11.7 1.0
O A:HOH480 3.7 50.3 1.0
OD1 A:ASN12 4.1 11.4 1.0
CG A:ASN12 4.2 10.9 1.0
OD1 A:ASN116 4.2 16.8 1.0
CG A:ASN116 4.3 17.1 1.0
CG A:MET69 4.3 9.5 1.0
CD2 A:LEU150 4.4 16.6 1.0
CG A:HIS22 4.7 9.2 1.0
CA A:MET69 4.9 10.4 1.0
N A:MET69 4.9 11.3 1.0

Chlorine binding site 2 out of 3 in 6ivv

Go back to Chlorine Binding Sites List in 6ivv
Chlorine binding site 2 out of 3 in the Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:23.7
occ:0.90
 NH1 A:ARG133 3.2 22.9 1.0
O A:HOH315 3.2 24.2 1.0
O A:HOH449 3.4 38.1 1.0
CD A:ARG105 3.7 26.4 1.0
CB A:LYS107 3.9 11.9 1.0
CB A:ARG105 3.9 14.3 1.0
CD A:ARG133 3.9 12.4 1.0
CZ A:ARG133 4.2 22.1 1.0
CD A:LYS107 4.3 18.1 1.0
CG A:LYS107 4.3 15.7 1.0
NH1 A:ARG105 4.3 43.5 1.0
CG A:ARG105 4.4 19.3 1.0
NE A:ARG133 4.5 16.0 1.0
CA A:LYS107 4.5 10.8 1.0
O A:LEU106 4.6 12.5 1.0
O A:HOH431 4.7 35.5 1.0
NE A:ARG105 4.9 33.5 1.0
N A:LYS107 4.9 9.8 1.0
C A:LEU106 5.0 10.1 1.0

Chlorine binding site 3 out of 3 in 6ivv

Go back to Chlorine Binding Sites List in 6ivv
Chlorine binding site 3 out of 3 in the Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Regions at 1.26A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:20.8
occ:0.90
 O A:HOH447 2.9 40.2 1.0
NE2 A:HIS94 2.9 8.9 1.0
NH1 A:ARG131 3.1 9.6 1.0
CG A:ARG131 3.3 8.1 1.0
CB A:ARG131 3.4 7.8 1.0
CD A:ARG131 3.5 8.2 1.0
CE1 A:HIS94 3.5 8.4 1.0
CG A:ARG133 3.7 10.1 1.0
CD A:LYS107 3.8 18.1 1.0
CD1 A:LEU118 3.8 10.4 1.0
CD A:ARG133 3.8 12.4 1.0
NE A:ARG133 3.9 16.0 1.0
CD2 A:HIS94 4.1 8.5 1.0
CZ A:ARG131 4.1 9.3 1.0
NE A:ARG131 4.2 8.4 1.0
CE A:LYS107 4.3 23.7 1.0
O A:GLY111 4.4 15.5 1.0
CZ A:ARG133 4.6 22.1 1.0
OE1 A:GLU96 4.6 13.2 1.0
CG A:LYS107 4.7 15.7 1.0
ND1 A:HIS94 4.7 8.0 1.0
CB A:LYS107 4.8 11.9 1.0
CA A:ARG131 4.9 7.6 1.0

Reference:

T.P.Singh, V.Viswanathan. Structure of Peptide T-Rna Hydrolase From Acinetobacter Baumannii with Multiple Surface Binding Sites at 1.26 Angstrom Resolution. To Be Published.
Page generated: Sun Jul 28 01:52:50 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy