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Chlorine in PDB 6iyz: Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release

Protein crystallography data

The structure of Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release, PDB code: 6iyz was solved by X.H.Wang, Y.Zeng, L.Qin, F.Gao, M.Su, Y.H.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.41 / 2.20
Space group F 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 268.210, 268.210, 268.210, 90.00, 90.00, 90.00
R / Rfree (%) 25.1 / 27.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release (pdb code 6iyz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release, PDB code: 6iyz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6iyz

Go back to Chlorine Binding Sites List in 6iyz
Chlorine binding site 1 out of 2 in the Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:65.0
occ:0.50
OH A:TYR106 3.6 59.4 1.0
NZ A:LYS107 3.7 53.4 1.0
CE2 A:TYR106 4.2 51.3 1.0
CZ A:TYR106 4.4 64.0 1.0
CE A:LYS107 5.0 55.6 1.0

Chlorine binding site 2 out of 2 in 6iyz

Go back to Chlorine Binding Sites List in 6iyz
Chlorine binding site 2 out of 2 in the Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:0.1
occ:1.00
N A:ASN84 4.0 50.7 1.0
N A:SER85 4.1 49.6 1.0
CB A:ASN84 4.2 54.6 1.0
OG A:SER85 4.3 66.0 1.0
CB A:SER85 4.6 53.0 1.0
CA A:ASN84 4.6 41.9 1.0
ND2 A:ASN84 4.7 41.7 1.0
C A:ASN83 4.9 45.8 1.0
CG A:ASN84 4.9 54.3 1.0
C A:ASN84 4.9 54.1 1.0
O A:SER82 4.9 66.8 1.0
CA A:SER85 5.0 55.3 1.0

Reference:

X.H.Wang, M.Su, F.Gao, W.Xie, Y.Zeng, D.L.Li, X.L.Liu, H.Zhao, L.Qin, F.Li, Q.Liu, O.B.Clarke, S.M.Lam, G.H.Shui, W.A.Hendrickson, Y.H.Chen. Structural Basis For Activity of Tric Counter-Ion Channels in Calcium Release. Proc.Natl.Acad.Sci.Usa V. 116 4238 2019.
ISSN: ESSN 1091-6490
PubMed: 30770441
DOI: 10.1073/PNAS.1817271116
Page generated: Sun Jul 28 01:57:59 2024

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