Chlorine in PDB 6jca: Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group
Protein crystallography data
The structure of Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group, PDB code: 6jca
was solved by
J.Xu,
J.Liu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
40.00 /
2.10
|
Space group
|
I 2 2 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
115.090,
125.220,
155.380,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
18.6 /
22.8
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group
(pdb code 6jca). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group, PDB code: 6jca:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 6jca
Go back to
Chlorine Binding Sites List in 6jca
Chlorine binding site 1 out
of 4 in the Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl602
b:25.8
occ:1.00
|
O
|
A:HOH826
|
3.1
|
23.1
|
1.0
|
N
|
A:ALA345
|
3.2
|
22.7
|
1.0
|
N
|
A:GLY347
|
3.3
|
22.3
|
1.0
|
N
|
A:GLY349
|
3.4
|
23.0
|
1.0
|
CA
|
A:ALA345
|
3.5
|
22.4
|
1.0
|
N
|
A:GLY348
|
3.6
|
23.6
|
1.0
|
C
|
A:ALA345
|
3.6
|
25.0
|
1.0
|
CA
|
A:GLY347
|
3.6
|
22.4
|
1.0
|
C
|
A:GLY347
|
3.6
|
22.7
|
1.0
|
N
|
A:ILE346
|
3.9
|
25.6
|
1.0
|
CE1
|
B:PHE375
|
3.9
|
31.1
|
1.0
|
O
|
A:ALA345
|
4.0
|
30.8
|
1.0
|
CA
|
A:GLY349
|
4.0
|
22.9
|
1.0
|
CB
|
A:SER57
|
4.2
|
25.1
|
1.0
|
CZ
|
B:PHE375
|
4.2
|
31.3
|
1.0
|
O
|
A:VAL351
|
4.3
|
20.5
|
1.0
|
O
|
A:GLY347
|
4.3
|
22.9
|
1.0
|
O
|
A:HOH844
|
4.3
|
39.2
|
1.0
|
C
|
A:LYS344
|
4.3
|
22.5
|
1.0
|
O
|
A:SER57
|
4.4
|
24.4
|
1.0
|
C
|
A:GLY348
|
4.4
|
25.5
|
1.0
|
C
|
A:ILE346
|
4.4
|
23.6
|
1.0
|
O
|
A:ALA343
|
4.5
|
20.8
|
1.0
|
CA
|
A:GLY348
|
4.5
|
25.7
|
1.0
|
CA
|
A:LYS344
|
4.7
|
21.0
|
1.0
|
OG
|
A:SER57
|
4.7
|
29.3
|
1.0
|
NE2
|
B:HIS82
|
4.7
|
22.1
|
1.0
|
CA
|
A:ILE346
|
4.8
|
26.9
|
1.0
|
CA
|
A:SER57
|
4.9
|
25.1
|
1.0
|
CB
|
A:ALA345
|
4.9
|
22.4
|
1.0
|
C
|
A:GLY349
|
5.0
|
23.2
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 6jca
Go back to
Chlorine Binding Sites List in 6jca
Chlorine binding site 2 out
of 4 in the Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl603
b:68.8
occ:1.00
|
O
|
B:HOH852
|
2.4
|
29.2
|
1.0
|
O
|
A:HOH738
|
2.4
|
33.3
|
1.0
|
O
|
A:TYR28
|
3.7
|
29.4
|
1.0
|
NH1
|
B:ARG90
|
3.9
|
42.6
|
1.0
|
O
|
B:HOH718
|
3.9
|
28.1
|
1.0
|
OE2
|
A:GLU27
|
4.1
|
29.1
|
1.0
|
O
|
A:HOH766
|
4.1
|
25.6
|
1.0
|
CA
|
A:VAL29
|
4.1
|
25.4
|
1.0
|
O
|
A:VAL29
|
4.3
|
30.2
|
1.0
|
CZ
|
B:ARG90
|
4.4
|
44.6
|
1.0
|
C
|
A:VAL29
|
4.5
|
24.8
|
1.0
|
NE
|
B:ARG90
|
4.5
|
44.3
|
1.0
|
O
|
B:HOH828
|
4.7
|
23.1
|
1.0
|
C
|
A:TYR28
|
4.7
|
28.4
|
1.0
|
N
|
A:VAL29
|
4.9
|
26.8
|
1.0
|
O
|
B:HOH805
|
4.9
|
18.7
|
1.0
|
CB
|
A:VAL29
|
5.0
|
27.4
|
1.0
|
O
|
B:HOH871
|
5.0
|
20.1
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 6jca
Go back to
Chlorine Binding Sites List in 6jca
Chlorine binding site 3 out
of 4 in the Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl604
b:64.6
occ:1.00
|
OE2
|
A:GLU390
|
3.9
|
41.5
|
1.0
|
C
|
A:LEU386
|
4.2
|
27.3
|
1.0
|
N
|
A:LYS387
|
4.2
|
27.0
|
1.0
|
O
|
A:LEU386
|
4.2
|
29.3
|
1.0
|
CE1
|
A:HIS70
|
4.3
|
30.8
|
1.0
|
CB
|
A:LEU386
|
4.3
|
28.6
|
1.0
|
CA
|
A:LYS387
|
4.4
|
28.4
|
1.0
|
O
|
A:HOH705
|
4.7
|
35.2
|
1.0
|
CD
|
A:GLU390
|
4.7
|
40.1
|
1.0
|
ND1
|
A:HIS70
|
4.9
|
31.0
|
1.0
|
CB
|
A:LYS387
|
4.9
|
27.7
|
1.0
|
CA
|
A:LEU386
|
4.9
|
28.8
|
1.0
|
CB
|
A:GLU390
|
4.9
|
34.1
|
1.0
|
CD
|
A:LYS387
|
5.0
|
32.2
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 6jca
Go back to
Chlorine Binding Sites List in 6jca
Chlorine binding site 4 out
of 4 in the Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl604
b:25.7
occ:1.00
|
O
|
B:HOH813
|
3.1
|
21.4
|
1.0
|
N
|
B:ALA345
|
3.2
|
22.1
|
1.0
|
N
|
B:GLY347
|
3.3
|
26.1
|
1.0
|
N
|
B:GLY349
|
3.4
|
24.7
|
1.0
|
CA
|
B:ALA345
|
3.4
|
22.8
|
1.0
|
O
|
B:HOH858
|
3.5
|
37.5
|
1.0
|
C
|
B:ALA345
|
3.5
|
24.3
|
1.0
|
CA
|
B:GLY347
|
3.5
|
25.7
|
1.0
|
N
|
B:GLY348
|
3.6
|
26.2
|
1.0
|
C
|
B:GLY347
|
3.6
|
24.6
|
1.0
|
N
|
B:ILE346
|
3.8
|
25.4
|
1.0
|
O
|
B:ALA345
|
4.0
|
26.2
|
1.0
|
CA
|
B:GLY349
|
4.0
|
24.0
|
1.0
|
CE1
|
A:PHE375
|
4.1
|
30.5
|
1.0
|
CB
|
B:SER57
|
4.2
|
22.9
|
1.0
|
O
|
B:VAL351
|
4.3
|
18.1
|
1.0
|
C
|
B:LYS344
|
4.3
|
22.4
|
1.0
|
CZ
|
A:PHE375
|
4.3
|
31.1
|
1.0
|
O
|
B:GLY347
|
4.3
|
23.2
|
1.0
|
O
|
B:SER57
|
4.4
|
22.6
|
1.0
|
C
|
B:ILE346
|
4.4
|
25.6
|
1.0
|
O
|
B:ALA343
|
4.4
|
20.0
|
1.0
|
O
|
B:HOH849
|
4.4
|
38.3
|
1.0
|
C
|
B:GLY348
|
4.4
|
26.3
|
1.0
|
CA
|
B:GLY348
|
4.6
|
26.1
|
1.0
|
CA
|
B:LYS344
|
4.6
|
22.7
|
1.0
|
NE2
|
A:HIS82
|
4.6
|
22.4
|
1.0
|
OG
|
B:SER57
|
4.7
|
25.2
|
1.0
|
CA
|
B:ILE346
|
4.8
|
27.6
|
1.0
|
CA
|
B:SER57
|
4.9
|
24.2
|
1.0
|
CB
|
B:ALA345
|
4.9
|
22.1
|
1.0
|
C
|
B:GLY349
|
4.9
|
22.8
|
1.0
|
C
|
B:SER57
|
5.0
|
25.1
|
1.0
|
CE1
|
A:HIS82
|
5.0
|
24.7
|
1.0
|
|
Reference:
J.Xu,
J.Liu.
Crystal Structure of Aminotransferase Crmg From Actinoalloteichus Sp. WH1-2216-6 in I222 Space Group To Be Published.
Page generated: Sun Jul 28 02:04:33 2024
|