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Chlorine in PDB 6jef: Crystal Structure of Apo-R168C/L169C-Fr

Protein crystallography data

The structure of Crystal Structure of Apo-R168C/L169C-Fr, PDB code: 6jef was solved by S.Abe, N.Ito, B.Maity, C.Lu, D.Lu, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.71 / 1.58
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 181.606, 181.606, 181.606, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 18.2

Other elements in 6jef:

The structure of Crystal Structure of Apo-R168C/L169C-Fr also contains other interesting chemical elements:

Cadmium (Cd) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Apo-R168C/L169C-Fr (pdb code 6jef). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Apo-R168C/L169C-Fr, PDB code: 6jef:

Chlorine binding site 1 out of 1 in 6jef

Go back to Chlorine Binding Sites List in 6jef
Chlorine binding site 1 out of 1 in the Crystal Structure of Apo-R168C/L169C-Fr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Apo-R168C/L169C-Fr within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl207

b:27.2
occ:1.00
CD A:CD202 2.5 17.3 0.5
OD2 A:ASP80 3.5 14.2 1.0
O A:HOH315 3.5 18.5 1.0
OD1 A:ASP80 3.8 12.1 1.0
CG A:ASP80 3.9 15.3 1.0

Reference:

S.Abe, N.Ito, B.Maity, C.Lu, D.Lu, T.Ueno. Coordination Design of Cadmium Ions at the 4-Fold Axis Channel of the Apo-Ferritin Cage. Dalton Trans V. 48 9759 2019.
ISSN: ESSN 1477-9234
PubMed: 30993287
DOI: 10.1039/C9DT00609E
Page generated: Sun Jul 28 02:05:09 2024

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