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Chlorine in PDB 6k8g: H/D Exchanged Hen Egg-White Lysozyme

Enzymatic activity of H/D Exchanged Hen Egg-White Lysozyme

All present enzymatic activity of H/D Exchanged Hen Egg-White Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of H/D Exchanged Hen Egg-White Lysozyme, PDB code: 6k8g was solved by A.Kita, Y.Morimoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.094, 79.094, 37.828, 90.00, 90.00, 90.00
R / Rfree (%) 22.5 / 25.5

Other elements in 6k8g:

The structure of H/D Exchanged Hen Egg-White Lysozyme also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the H/D Exchanged Hen Egg-White Lysozyme (pdb code 6k8g). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the H/D Exchanged Hen Egg-White Lysozyme, PDB code: 6k8g:

Chlorine binding site 1 out of 1 in 6k8g

Go back to Chlorine Binding Sites List in 6k8g
Chlorine binding site 1 out of 1 in the H/D Exchanged Hen Egg-White Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of H/D Exchanged Hen Egg-White Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:26.7
occ:1.00
HH A:TYR23 2.7 17.9 0.5
DH A:TYR23 2.8 17.9 0.5
OH A:TYR23 2.9 14.9 1.0
HE2 A:TYR23 3.2 21.2 1.0
D1 A:HOH347 3.3 33.2 1.0
HA3 A:GLY104 3.4 20.7 1.0
D2 A:HOH347 3.4 33.2 1.0
CZ A:TYR23 3.7 10.8 1.0
CE2 A:TYR23 3.7 17.7 1.0
O A:HOH347 3.8 27.6 1.0
D1 A:HOH369 4.1 50.1 1.0
HA2 A:GLY104 4.2 20.7 1.0
CA A:GLY104 4.2 17.2 1.0
O A:HOH369 4.4 41.8 1.0
O A:ARG21 4.7 20.0 1.0
D A:MET105 4.7 16.4 0.7
H A:MET105 4.7 16.4 0.3
N A:GLY104 4.8 17.6 1.0
HB3 A:ARG21 4.8 19.0 1.0
CE1 A:TYR23 4.9 17.5 1.0
CD2 A:TYR23 4.9 11.7 1.0

Reference:

A.Kita, Y.Morimoto. H/D Exchanged Hen Egg-White Lysozyme To Be Published.
Page generated: Sun Jul 28 02:24:32 2024

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