Chlorine in PDB 6kkr: Human KCC1 Structure Determined in Kcl and Detergent Gdn
Other elements in 6kkr:
The structure of Human KCC1 Structure Determined in Kcl and Detergent Gdn also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Human KCC1 Structure Determined in Kcl and Detergent Gdn
(pdb code 6kkr). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Human KCC1 Structure Determined in Kcl and Detergent Gdn, PDB code: 6kkr:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 6kkr
Go back to
Chlorine Binding Sites List in 6kkr
Chlorine binding site 1 out
of 4 in the Human KCC1 Structure Determined in Kcl and Detergent Gdn
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Human KCC1 Structure Determined in Kcl and Detergent Gdn within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1105
b:56.0
occ:1.00
|
OH
|
A:TYR589
|
2.5
|
46.3
|
1.0
|
N
|
A:GLY433
|
3.2
|
52.2
|
1.0
|
CE1
|
A:PHE205
|
3.5
|
47.3
|
1.0
|
CZ
|
A:TYR589
|
3.5
|
46.3
|
1.0
|
N
|
A:ILE434
|
3.5
|
56.1
|
1.0
|
CG
|
A:MET435
|
3.6
|
60.1
|
1.0
|
N
|
A:MET435
|
3.6
|
60.1
|
1.0
|
CA
|
A:GLY433
|
3.7
|
52.2
|
1.0
|
CE1
|
A:TYR589
|
3.8
|
46.3
|
1.0
|
CB
|
A:MET435
|
3.8
|
60.1
|
1.0
|
CE1
|
A:PHE585
|
3.8
|
41.9
|
1.0
|
C
|
A:GLY433
|
3.9
|
52.2
|
1.0
|
CD1
|
A:PHE585
|
4.0
|
41.9
|
1.0
|
CD1
|
A:PHE205
|
4.1
|
47.3
|
1.0
|
C
|
A:THR432
|
4.3
|
46.2
|
1.0
|
CA
|
A:MET435
|
4.3
|
60.1
|
1.0
|
CB
|
A:THR432
|
4.4
|
46.2
|
1.0
|
CA
|
A:ILE434
|
4.4
|
56.1
|
1.0
|
CZ
|
A:PHE205
|
4.5
|
47.3
|
1.0
|
C
|
A:ILE434
|
4.5
|
56.1
|
1.0
|
CA
|
A:THR432
|
4.5
|
46.2
|
1.0
|
CB
|
A:ILE434
|
4.7
|
56.1
|
1.0
|
CE2
|
A:TYR589
|
4.7
|
46.3
|
1.0
|
CZ
|
A:PHE585
|
4.8
|
41.9
|
1.0
|
O
|
A:GLY433
|
5.0
|
52.2
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 6kkr
Go back to
Chlorine Binding Sites List in 6kkr
Chlorine binding site 2 out
of 4 in the Human KCC1 Structure Determined in Kcl and Detergent Gdn
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Human KCC1 Structure Determined in Kcl and Detergent Gdn within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1107
b:52.1
occ:1.00
|
N
|
A:VAL135
|
3.1
|
46.6
|
1.0
|
CA
|
A:GLY134
|
3.4
|
47.7
|
1.0
|
N
|
A:ILE136
|
3.5
|
45.3
|
1.0
|
C
|
A:GLY134
|
3.5
|
47.7
|
1.0
|
O
|
A:PRO429
|
3.6
|
41.0
|
1.0
|
CA
|
A:SER430
|
3.8
|
43.9
|
1.0
|
K
|
A:K1106
|
3.9
|
48.2
|
1.0
|
N
|
A:GLY134
|
3.9
|
47.7
|
1.0
|
CG1
|
A:VAL135
|
3.9
|
46.6
|
1.0
|
CB
|
A:ILE136
|
4.1
|
45.3
|
1.0
|
CG1
|
A:ILE136
|
4.1
|
45.3
|
1.0
|
CA
|
A:VAL135
|
4.1
|
46.6
|
1.0
|
OG
|
A:SER430
|
4.1
|
43.9
|
1.0
|
OH
|
A:TYR216
|
4.3
|
42.9
|
1.0
|
C
|
A:PRO429
|
4.3
|
41.0
|
1.0
|
CD1
|
A:ILE136
|
4.3
|
45.3
|
1.0
|
C
|
A:VAL135
|
4.3
|
46.6
|
1.0
|
CE1
|
A:TYR216
|
4.3
|
42.9
|
1.0
|
O
|
A:ILE132
|
4.4
|
47.0
|
1.0
|
N
|
A:SER430
|
4.4
|
43.9
|
1.0
|
CA
|
A:ILE136
|
4.4
|
45.3
|
1.0
|
CB
|
A:SER430
|
4.4
|
43.9
|
1.0
|
O
|
A:GLY134
|
4.5
|
47.7
|
1.0
|
CB
|
A:VAL135
|
4.6
|
46.6
|
1.0
|
C
|
A:PHE133
|
4.6
|
47.2
|
1.0
|
CE
|
A:MET215
|
4.8
|
39.7
|
1.0
|
CZ
|
A:TYR216
|
4.8
|
42.9
|
1.0
|
C
|
A:SER430
|
4.8
|
43.9
|
1.0
|
O
|
A:SER430
|
4.9
|
43.9
|
1.0
|
N
|
A:LEU137
|
4.9
|
45.4
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 6kkr
Go back to
Chlorine Binding Sites List in 6kkr
Chlorine binding site 3 out
of 4 in the Human KCC1 Structure Determined in Kcl and Detergent Gdn
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Human KCC1 Structure Determined in Kcl and Detergent Gdn within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1105
b:55.7
occ:1.00
|
OH
|
B:TYR589
|
2.5
|
46.3
|
1.0
|
N
|
B:GLY433
|
3.2
|
52.2
|
1.0
|
CE1
|
B:PHE205
|
3.5
|
47.4
|
1.0
|
CZ
|
B:TYR589
|
3.5
|
46.3
|
1.0
|
N
|
B:ILE434
|
3.5
|
56.2
|
1.0
|
CG
|
B:MET435
|
3.6
|
60.3
|
1.0
|
N
|
B:MET435
|
3.6
|
60.3
|
1.0
|
CA
|
B:GLY433
|
3.7
|
52.2
|
1.0
|
CE1
|
B:TYR589
|
3.8
|
46.3
|
1.0
|
CB
|
B:MET435
|
3.8
|
60.3
|
1.0
|
CE1
|
B:PHE585
|
3.8
|
42.2
|
1.0
|
C
|
B:GLY433
|
3.9
|
52.2
|
1.0
|
CD1
|
B:PHE585
|
4.0
|
42.2
|
1.0
|
CD1
|
B:PHE205
|
4.1
|
47.4
|
1.0
|
C
|
B:THR432
|
4.3
|
46.4
|
1.0
|
CA
|
B:MET435
|
4.3
|
60.3
|
1.0
|
CB
|
B:THR432
|
4.4
|
46.4
|
1.0
|
CA
|
B:ILE434
|
4.4
|
56.2
|
1.0
|
CZ
|
B:PHE205
|
4.5
|
47.4
|
1.0
|
C
|
B:ILE434
|
4.5
|
56.2
|
1.0
|
CA
|
B:THR432
|
4.5
|
46.4
|
1.0
|
CB
|
B:ILE434
|
4.7
|
56.2
|
1.0
|
CE2
|
B:TYR589
|
4.7
|
46.3
|
1.0
|
CZ
|
B:PHE585
|
4.8
|
42.2
|
1.0
|
O
|
B:GLY433
|
5.0
|
52.2
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 6kkr
Go back to
Chlorine Binding Sites List in 6kkr
Chlorine binding site 4 out
of 4 in the Human KCC1 Structure Determined in Kcl and Detergent Gdn
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Human KCC1 Structure Determined in Kcl and Detergent Gdn within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1107
b:52.9
occ:1.00
|
N
|
B:VAL135
|
3.1
|
47.1
|
1.0
|
CA
|
B:GLY134
|
3.4
|
48.2
|
1.0
|
N
|
B:ILE136
|
3.5
|
45.8
|
1.0
|
C
|
B:GLY134
|
3.5
|
48.2
|
1.0
|
O
|
B:PRO429
|
3.6
|
41.5
|
1.0
|
CA
|
B:SER430
|
3.8
|
44.3
|
1.0
|
K
|
B:K1106
|
3.9
|
48.6
|
1.0
|
N
|
B:GLY134
|
3.9
|
48.2
|
1.0
|
CG1
|
B:VAL135
|
3.9
|
47.1
|
1.0
|
CB
|
B:ILE136
|
4.1
|
45.8
|
1.0
|
CG1
|
B:ILE136
|
4.1
|
45.8
|
1.0
|
CA
|
B:VAL135
|
4.1
|
47.1
|
1.0
|
OG
|
B:SER430
|
4.1
|
44.3
|
1.0
|
OH
|
B:TYR216
|
4.3
|
43.3
|
1.0
|
C
|
B:PRO429
|
4.3
|
41.5
|
1.0
|
CD1
|
B:ILE136
|
4.3
|
45.8
|
1.0
|
C
|
B:VAL135
|
4.3
|
47.1
|
1.0
|
CE1
|
B:TYR216
|
4.3
|
43.3
|
1.0
|
O
|
B:ILE132
|
4.3
|
47.3
|
1.0
|
N
|
B:SER430
|
4.4
|
44.3
|
1.0
|
CA
|
B:ILE136
|
4.4
|
45.8
|
1.0
|
CB
|
B:SER430
|
4.4
|
44.3
|
1.0
|
O
|
B:GLY134
|
4.5
|
48.2
|
1.0
|
C
|
B:PHE133
|
4.6
|
47.6
|
1.0
|
CB
|
B:VAL135
|
4.6
|
47.1
|
1.0
|
CE
|
B:MET215
|
4.8
|
40.2
|
1.0
|
CZ
|
B:TYR216
|
4.8
|
43.3
|
1.0
|
C
|
B:SER430
|
4.8
|
44.3
|
1.0
|
O
|
B:SER430
|
4.9
|
44.3
|
1.0
|
N
|
B:LEU137
|
4.9
|
46.0
|
1.0
|
|
Reference:
S.Liu,
S.Chang,
B.Han,
L.Xu,
M.Zhang,
C.Zhao,
W.Yang,
F.Wang,
J.Li,
E.Delpire,
S.Ye,
X.C.Bai,
J.Guo.
Cryo-Em Structures of the Human Cation-Chloride Cotransporter KCC1. Science V. 366 505 2019.
ISSN: ESSN 1095-9203
PubMed: 31649201
DOI: 10.1126/SCIENCE.AAY3129
Page generated: Sun Jul 28 02:30:15 2024
|