Chlorine in PDB 6lbd: Shrimp Ferritin T158R G159R
Enzymatic activity of Shrimp Ferritin T158R G159R
All present enzymatic activity of Shrimp Ferritin T158R G159R:
1.16.3.1;
Protein crystallography data
The structure of Shrimp Ferritin T158R G159R, PDB code: 6lbd
was solved by
G.Zhao,
H.Chen,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
23.76 /
1.39
|
|
Space group
|
P 4 3 2
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
118.781,
118.781,
118.781,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
13.8 /
14.8
|
Other elements in 6lbd:
The structure of Shrimp Ferritin T158R G159R also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Shrimp Ferritin T158R G159R
(pdb code 6lbd). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 10 binding sites of Chlorine where determined in the
Shrimp Ferritin T158R G159R, PDB code: 6lbd:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 1 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:12.5
occ:0.83
|
HG
|
A:SER16
|
2.3
|
12.8
|
0.7
|
|
HG1
|
A:THR117
|
2.3
|
16.8
|
1.0
|
|
HG
|
A:SER16
|
2.7
|
20.9
|
0.3
|
|
HA
|
A:LEU114
|
2.8
|
13.4
|
1.0
|
|
OG
|
A:SER16
|
3.0
|
10.6
|
0.7
|
|
OG1
|
A:THR117
|
3.1
|
14.0
|
1.0
|
|
O
|
A:HOH407
|
3.1
|
13.7
|
1.0
|
|
OG
|
A:SER16
|
3.2
|
17.4
|
0.3
|
|
HB3
|
A:SER16
|
3.2
|
13.5
|
0.3
|
|
HB2
|
A:SER16
|
3.4
|
12.8
|
0.7
|
|
O
|
A:HOH560
|
3.5
|
44.1
|
1.0
|
|
O
|
A:HOH504
|
3.5
|
38.5
|
1.0
|
|
HB
|
A:THR117
|
3.5
|
15.3
|
1.0
|
|
HD13
|
A:LEU114
|
3.6
|
22.7
|
1.0
|
|
CA
|
A:LEU114
|
3.6
|
11.2
|
1.0
|
|
O
|
A:GLU113
|
3.7
|
11.2
|
1.0
|
|
CB
|
A:SER16
|
3.7
|
10.7
|
0.7
|
|
HB3
|
A:GLU113
|
3.7
|
13.9
|
1.0
|
|
CB
|
A:SER16
|
3.7
|
11.2
|
0.3
|
|
N
|
A:LEU114
|
3.7
|
9.4
|
1.0
|
|
C
|
A:GLU113
|
3.8
|
10.1
|
1.0
|
|
O
|
A:HOH313
|
3.8
|
46.4
|
1.0
|
|
CB
|
A:THR117
|
3.8
|
12.8
|
1.0
|
|
HZ3
|
A:LYS19
|
3.8
|
32.3
|
0.5
|
|
HB2
|
A:LEU114
|
3.9
|
15.1
|
1.0
|
|
HG21
|
A:THR117
|
3.9
|
15.6
|
1.0
|
|
HB3
|
A:SER16
|
4.0
|
12.8
|
0.7
|
|
H
|
A:LEU114
|
4.2
|
11.2
|
1.0
|
|
HB2
|
A:SER16
|
4.2
|
13.5
|
0.3
|
|
CB
|
A:LEU114
|
4.3
|
12.5
|
1.0
|
|
O
|
A:HOH458
|
4.3
|
24.6
|
1.0
|
|
HD12
|
A:LEU114
|
4.3
|
22.7
|
1.0
|
|
CD1
|
A:LEU114
|
4.4
|
18.9
|
1.0
|
|
CG2
|
A:THR117
|
4.4
|
13.0
|
1.0
|
|
HB2
|
A:GLU113
|
4.4
|
13.9
|
1.0
|
|
CB
|
A:GLU113
|
4.4
|
11.6
|
1.0
|
|
HZ1
|
A:LYS19
|
4.5
|
32.3
|
0.5
|
|
H
|
A:THR117
|
4.6
|
13.3
|
0.2
|
|
H
|
A:THR117
|
4.6
|
13.3
|
0.8
|
|
NZ
|
A:LYS19
|
4.6
|
26.9
|
0.5
|
|
CA
|
A:GLU113
|
4.7
|
9.7
|
1.0
|
|
C
|
A:LEU114
|
4.8
|
10.7
|
1.0
|
|
HA
|
A:SER16
|
4.9
|
12.4
|
0.3
|
|
CG
|
A:LEU114
|
4.9
|
16.3
|
1.0
|
|
HG22
|
A:THR117
|
4.9
|
15.6
|
1.0
|
|
OE1
|
A:GLN20
|
5.0
|
12.6
|
0.5
|
|
CA
|
A:SER16
|
5.0
|
10.3
|
0.3
|
|
HA
|
A:SER16
|
5.0
|
12.5
|
0.7
|
|
Chlorine binding site 2 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 2 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl202
b:45.5
occ:1.00
|
HB2
|
A:HIS10
|
2.9
|
14.6
|
1.0
|
|
O
|
A:HOH396
|
2.9
|
15.1
|
1.0
|
|
HD2
|
A:HIS10
|
2.9
|
25.8
|
1.0
|
|
O
|
A:HOH480
|
3.3
|
41.9
|
1.0
|
|
O
|
A:HOH547
|
3.3
|
39.0
|
1.0
|
|
O
|
A:HOH537
|
3.6
|
46.1
|
1.0
|
|
CD2
|
A:HIS10
|
3.7
|
21.5
|
1.0
|
|
CB
|
A:HIS10
|
3.7
|
12.1
|
1.0
|
|
HA
|
A:HIS10
|
3.8
|
12.7
|
1.0
|
|
O
|
A:HOH364
|
3.9
|
25.4
|
1.0
|
|
HB3
|
A:ASN121
|
3.9
|
14.8
|
1.0
|
|
CG
|
A:HIS10
|
4.0
|
15.5
|
1.0
|
|
CA
|
A:HIS10
|
4.0
|
10.5
|
1.0
|
|
N
|
A:HIS10
|
4.1
|
10.2
|
1.0
|
|
OD1
|
A:ASN8
|
4.1
|
12.5
|
1.0
|
|
HA
|
A:ASN8
|
4.1
|
10.1
|
1.0
|
|
H
|
A:HIS10
|
4.1
|
12.2
|
1.0
|
|
O
|
A:ASN121
|
4.2
|
12.7
|
1.0
|
|
O
|
A:HOH506
|
4.4
|
43.2
|
1.0
|
|
HB3
|
A:HIS10
|
4.5
|
14.6
|
1.0
|
|
C
|
A:ASN8
|
4.5
|
8.0
|
1.0
|
|
O
|
A:HOH334
|
4.5
|
34.0
|
1.0
|
|
C
|
A:TYR9
|
4.6
|
9.3
|
1.0
|
|
O
|
A:ASN8
|
4.6
|
10.1
|
1.0
|
|
N
|
A:TYR9
|
4.6
|
9.4
|
1.0
|
|
O
|
A:HOH350
|
4.7
|
11.9
|
1.0
|
|
HD22
|
A:ASN121
|
4.8
|
27.6
|
1.0
|
|
CA
|
A:ASN8
|
4.8
|
8.4
|
1.0
|
|
H
|
A:TYR9
|
4.8
|
11.2
|
1.0
|
|
CB
|
A:ASN121
|
4.9
|
12.3
|
1.0
|
|
NE2
|
A:HIS10
|
4.9
|
21.6
|
1.0
|
|
CG
|
A:ASN8
|
5.0
|
10.1
|
1.0
|
|
Chlorine binding site 3 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 3 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:25.4
occ:0.72
|
H
|
A:GLU11
|
2.2
|
12.9
|
0.6
|
|
H
|
A:GLU11
|
2.2
|
13.0
|
0.5
|
|
HG3
|
A:GLU11
|
2.6
|
24.9
|
0.5
|
|
HA
|
A:HIS10
|
2.8
|
12.7
|
1.0
|
|
HG2
|
A:GLU11
|
2.8
|
18.3
|
0.6
|
|
N
|
A:GLU11
|
3.0
|
10.8
|
0.6
|
|
N
|
A:GLU11
|
3.0
|
10.8
|
0.5
|
|
HB3
|
A:GLU11
|
3.3
|
16.3
|
0.6
|
|
HB2
|
A:GLU11
|
3.3
|
16.4
|
0.5
|
|
O
|
A:HOH522
|
3.4
|
42.7
|
1.0
|
|
O
|
A:HOH537
|
3.4
|
46.1
|
1.0
|
|
CG
|
A:GLU11
|
3.5
|
20.7
|
0.5
|
|
CG
|
A:GLU11
|
3.6
|
15.2
|
0.6
|
|
CA
|
A:HIS10
|
3.6
|
10.5
|
1.0
|
|
CB
|
A:GLU11
|
3.7
|
13.7
|
0.5
|
|
CG
|
A:HIS10
|
3.7
|
15.5
|
1.0
|
|
CB
|
A:GLU11
|
3.7
|
13.6
|
0.6
|
|
C
|
A:HIS10
|
3.8
|
10.8
|
1.0
|
|
ND1
|
A:HIS10
|
3.9
|
17.6
|
1.0
|
|
CD2
|
A:HIS10
|
3.9
|
21.5
|
1.0
|
|
CA
|
A:GLU11
|
4.0
|
10.9
|
0.6
|
|
CA
|
A:GLU11
|
4.0
|
10.9
|
0.5
|
|
CE1
|
A:HIS10
|
4.1
|
20.9
|
1.0
|
|
NE2
|
A:HIS10
|
4.1
|
21.6
|
1.0
|
|
CD
|
A:GLU11
|
4.2
|
25.7
|
0.6
|
|
HG2
|
A:GLU11
|
4.2
|
24.9
|
0.5
|
|
CD
|
A:GLU11
|
4.2
|
33.0
|
0.5
|
|
CB
|
A:HIS10
|
4.2
|
12.1
|
1.0
|
|
HD2
|
A:HIS10
|
4.3
|
25.8
|
1.0
|
|
HG3
|
A:GLU11
|
4.3
|
18.3
|
0.6
|
|
OE1
|
A:GLU11
|
4.4
|
29.8
|
0.6
|
|
O
|
A:TYR9
|
4.4
|
11.1
|
1.0
|
|
O
|
A:HOH507
|
4.4
|
43.5
|
1.0
|
|
HE1
|
A:HIS10
|
4.5
|
25.1
|
1.0
|
|
HA
|
A:GLU11
|
4.5
|
13.1
|
0.6
|
|
HA
|
A:GLU11
|
4.5
|
13.1
|
0.5
|
|
HH11
|
A:ARG6
|
4.5
|
13.5
|
1.0
|
|
HE2
|
A:HIS10
|
4.5
|
25.9
|
1.0
|
|
H
|
A:ASP12
|
4.6
|
12.7
|
0.6
|
|
H
|
A:ASP12
|
4.6
|
12.7
|
0.5
|
|
HB3
|
A:GLU11
|
4.7
|
16.4
|
0.5
|
|
OE1
|
A:GLU11
|
4.7
|
26.7
|
0.5
|
|
HB2
|
A:GLU11
|
4.7
|
16.3
|
0.6
|
|
HB2
|
A:HIS10
|
4.7
|
14.6
|
1.0
|
|
N
|
A:HIS10
|
4.7
|
10.2
|
1.0
|
|
OE2
|
A:GLU11
|
4.8
|
34.2
|
0.5
|
|
OE2
|
A:GLU11
|
4.9
|
27.3
|
0.6
|
|
HB3
|
A:HIS10
|
5.0
|
14.6
|
1.0
|
|
Chlorine binding site 4 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 4 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl204
b:11.1
occ:0.71
|
HG1
|
A:THR92
|
2.3
|
15.7
|
1.0
|
|
HH11
|
A:ARG158
|
2.5
|
14.1
|
0.6
|
|
HD3
|
A:ARG158
|
2.9
|
10.9
|
0.4
|
|
HB3
|
A:LEU94
|
3.0
|
12.3
|
1.0
|
|
HG21
|
A:THR92
|
3.0
|
18.2
|
1.0
|
|
O
|
A:HOH566
|
3.1
|
45.9
|
1.0
|
|
HD23
|
A:LEU94
|
3.1
|
14.6
|
1.0
|
|
OG1
|
A:THR92
|
3.1
|
13.1
|
1.0
|
|
HD3
|
A:ARG158
|
3.1
|
11.9
|
0.6
|
|
HG2
|
A:PRO157
|
3.3
|
11.9
|
1.0
|
|
NH1
|
A:ARG158
|
3.3
|
11.8
|
0.6
|
|
O
|
A:HOH417
|
3.3
|
15.9
|
1.0
|
|
HG3
|
A:ARG158
|
3.4
|
11.5
|
0.6
|
|
HB
|
A:THR92
|
3.6
|
15.9
|
1.0
|
|
HH12
|
A:ARG158
|
3.6
|
14.1
|
0.6
|
|
HG2
|
A:ARG158
|
3.7
|
10.6
|
0.4
|
|
CB
|
A:THR92
|
3.7
|
13.2
|
1.0
|
|
CD
|
A:ARG158
|
3.7
|
9.1
|
0.4
|
|
CG2
|
A:THR92
|
3.8
|
15.1
|
1.0
|
|
HB2
|
A:PRO157
|
3.8
|
10.9
|
1.0
|
|
CB
|
A:LEU94
|
3.8
|
10.2
|
1.0
|
|
HH21
|
A:ARG158
|
3.9
|
13.6
|
0.4
|
|
HG2
|
A:ARG158
|
3.9
|
11.5
|
0.6
|
|
HG3
|
A:PRO157
|
3.9
|
11.9
|
1.0
|
|
CG
|
A:ARG158
|
3.9
|
9.5
|
0.6
|
|
CD
|
A:ARG158
|
3.9
|
9.9
|
0.6
|
|
HG3
|
A:GLU95
|
3.9
|
15.0
|
1.0
|
|
CG
|
A:PRO157
|
3.9
|
9.9
|
1.0
|
|
HD2
|
A:ARG158
|
3.9
|
10.9
|
0.4
|
|
CD2
|
A:LEU94
|
4.0
|
12.2
|
1.0
|
|
HB2
|
A:LEU94
|
4.0
|
12.3
|
1.0
|
|
HD22
|
A:LEU94
|
4.1
|
14.6
|
1.0
|
|
CG
|
A:ARG158
|
4.2
|
8.8
|
0.4
|
|
HG23
|
A:THR92
|
4.2
|
18.2
|
1.0
|
|
H
|
A:LEU94
|
4.3
|
11.6
|
1.0
|
|
CB
|
A:PRO157
|
4.4
|
9.1
|
1.0
|
|
CZ
|
A:ARG158
|
4.4
|
9.6
|
0.6
|
|
HG3
|
A:ARG158
|
4.4
|
10.6
|
0.4
|
|
CG
|
A:LEU94
|
4.4
|
10.3
|
1.0
|
|
H
|
A:GLU95
|
4.4
|
12.6
|
1.0
|
|
HG22
|
A:THR92
|
4.5
|
18.2
|
1.0
|
|
HG
|
A:LEU94
|
4.6
|
12.4
|
1.0
|
|
NH2
|
A:ARG158
|
4.6
|
11.4
|
0.4
|
|
NE
|
A:ARG158
|
4.6
|
10.8
|
0.6
|
|
HD2
|
A:ARG158
|
4.6
|
11.9
|
0.6
|
|
HD21
|
A:LEU94
|
4.7
|
14.6
|
1.0
|
|
O
|
A:HOH342
|
4.8
|
46.4
|
1.0
|
|
O
|
A:HOH478
|
4.8
|
31.8
|
1.0
|
|
NE
|
A:ARG158
|
4.8
|
11.6
|
0.4
|
|
CG
|
A:GLU95
|
4.9
|
12.5
|
1.0
|
|
CA
|
A:LEU94
|
4.9
|
9.9
|
1.0
|
|
O
|
A:PRO157
|
4.9
|
10.2
|
1.0
|
|
N
|
A:LEU94
|
5.0
|
9.7
|
1.0
|
|
N
|
A:GLU95
|
5.0
|
10.5
|
1.0
|
|
HB3
|
A:PRO157
|
5.0
|
10.9
|
1.0
|
|
Chlorine binding site 5 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 5 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl205
b:16.8
occ:0.80
|
H
|
A:TYR9
|
2.4
|
11.2
|
1.0
|
|
HG2
|
A:ARG6
|
2.8
|
11.6
|
1.0
|
|
O
|
A:HOH509
|
2.9
|
42.0
|
1.0
|
|
HE
|
A:ARG6
|
3.0
|
14.1
|
1.0
|
|
H
|
A:ASN8
|
3.1
|
10.5
|
1.0
|
|
O
|
A:HOH547
|
3.1
|
39.0
|
1.0
|
|
N
|
A:TYR9
|
3.2
|
9.4
|
1.0
|
|
HD3
|
A:ARG6
|
3.2
|
14.7
|
1.0
|
|
O
|
A:HOH522
|
3.3
|
42.7
|
1.0
|
|
O
|
A:HOH537
|
3.3
|
46.1
|
1.0
|
|
N
|
A:ASN8
|
3.4
|
8.7
|
1.0
|
|
O
|
A:TYR9
|
3.4
|
11.1
|
1.0
|
|
HA
|
A:GLN7
|
3.5
|
9.5
|
1.0
|
|
NE
|
A:ARG6
|
3.6
|
11.7
|
1.0
|
|
CG
|
A:ARG6
|
3.6
|
9.6
|
1.0
|
|
O
|
A:HOH472
|
3.6
|
24.3
|
1.0
|
|
CD
|
A:ARG6
|
3.7
|
12.3
|
1.0
|
|
HB3
|
A:TYR9
|
3.7
|
12.4
|
1.0
|
|
C
|
A:GLN7
|
3.9
|
9.1
|
1.0
|
|
HA
|
A:ASN8
|
4.0
|
10.1
|
1.0
|
|
CA
|
A:GLN7
|
4.0
|
7.9
|
1.0
|
|
C
|
A:TYR9
|
4.0
|
9.3
|
1.0
|
|
CA
|
A:TYR9
|
4.0
|
8.7
|
1.0
|
|
N
|
A:GLN7
|
4.0
|
7.9
|
1.0
|
|
CA
|
A:ASN8
|
4.1
|
8.4
|
1.0
|
|
C
|
A:ASN8
|
4.1
|
8.0
|
1.0
|
|
H
|
A:GLN7
|
4.3
|
9.5
|
1.0
|
|
HG3
|
A:ARG6
|
4.3
|
11.6
|
1.0
|
|
CB
|
A:TYR9
|
4.3
|
10.3
|
1.0
|
|
HB3
|
A:ARG6
|
4.3
|
12.5
|
1.0
|
|
C
|
A:ARG6
|
4.3
|
9.2
|
1.0
|
|
CB
|
A:ARG6
|
4.5
|
10.4
|
1.0
|
|
HB2
|
A:TYR9
|
4.5
|
12.4
|
1.0
|
|
O
|
A:ARG6
|
4.5
|
10.5
|
1.0
|
|
HD2
|
A:ARG6
|
4.6
|
14.7
|
1.0
|
|
O
|
A:GLN7
|
4.7
|
9.1
|
1.0
|
|
HH11
|
A:ARG6
|
4.8
|
13.5
|
1.0
|
|
CZ
|
A:ARG6
|
4.9
|
10.9
|
1.0
|
|
HA
|
A:TYR9
|
4.9
|
10.5
|
1.0
|
|
Chlorine binding site 6 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 6 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl206
b:18.4
occ:0.72
|
H
|
A:GLN88
|
2.3
|
13.5
|
0.8
|
|
H
|
A:GLN88
|
2.3
|
13.5
|
0.2
|
|
H
|
A:GLU89
|
2.7
|
15.3
|
1.0
|
|
HE3
|
A:MET87
|
2.7
|
34.6
|
0.8
|
|
HE2
|
A:MET87
|
3.0
|
27.7
|
0.2
|
|
O
|
A:HOH524
|
3.1
|
46.0
|
1.0
|
|
N
|
A:GLN88
|
3.1
|
11.2
|
1.0
|
|
HB2
|
A:GLN88
|
3.2
|
16.6
|
1.0
|
|
HB3
|
A:MET87
|
3.2
|
17.7
|
0.2
|
|
HB3
|
A:MET87
|
3.4
|
16.5
|
0.8
|
|
N
|
A:GLU89
|
3.4
|
12.7
|
1.0
|
|
HA
|
A:MET87
|
3.5
|
16.4
|
0.8
|
|
HA
|
A:MET87
|
3.5
|
16.8
|
0.2
|
|
CE
|
A:MET87
|
3.5
|
28.9
|
0.8
|
|
HB2
|
A:GLU89
|
3.6
|
20.0
|
1.0
|
|
HE1
|
A:MET87
|
3.7
|
34.6
|
0.8
|
|
HG3
|
A:GLU89
|
3.7
|
27.3
|
1.0
|
|
CA
|
A:GLN88
|
3.9
|
10.9
|
1.0
|
|
CB
|
A:GLN88
|
3.9
|
13.8
|
1.0
|
|
CE
|
A:MET87
|
3.9
|
23.1
|
0.2
|
|
O
|
A:GLU89
|
4.0
|
15.1
|
1.0
|
|
CA
|
A:MET87
|
4.0
|
14.0
|
0.2
|
|
HG2
|
A:GLN88
|
4.0
|
17.7
|
1.0
|
|
CA
|
A:MET87
|
4.0
|
13.7
|
0.8
|
|
CB
|
A:MET87
|
4.0
|
14.8
|
0.2
|
|
C
|
A:MET87
|
4.0
|
13.3
|
0.2
|
|
C
|
A:MET87
|
4.1
|
12.9
|
0.8
|
|
C
|
A:GLN88
|
4.1
|
11.9
|
1.0
|
|
CB
|
A:MET87
|
4.1
|
13.7
|
0.8
|
|
HE1
|
A:MET87
|
4.2
|
27.7
|
0.2
|
|
HE2
|
A:MET87
|
4.2
|
34.6
|
0.8
|
|
CB
|
A:GLU89
|
4.2
|
16.7
|
1.0
|
|
CA
|
A:GLU89
|
4.3
|
13.8
|
1.0
|
|
SD
|
A:MET87
|
4.4
|
19.9
|
0.8
|
|
CG
|
A:GLU89
|
4.4
|
22.7
|
1.0
|
|
HE3
|
A:MET87
|
4.5
|
27.7
|
0.2
|
|
CG
|
A:GLN88
|
4.5
|
14.7
|
1.0
|
|
HB2
|
A:MET87
|
4.6
|
17.7
|
0.2
|
|
C
|
A:GLU89
|
4.6
|
12.8
|
1.0
|
|
HB3
|
A:GLN88
|
4.7
|
16.6
|
1.0
|
|
OE1
|
A:GLU89
|
4.7
|
34.6
|
1.0
|
|
HA
|
A:GLN88
|
4.8
|
13.1
|
1.0
|
|
HB2
|
A:MET87
|
4.9
|
16.5
|
0.8
|
|
HG3
|
A:GLN88
|
4.9
|
17.7
|
1.0
|
|
CG
|
A:MET87
|
4.9
|
17.7
|
0.8
|
|
SD
|
A:MET87
|
4.9
|
33.1
|
0.2
|
|
Chlorine binding site 7 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 7 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl207
b:21.2
occ:0.65
|
H
|
A:ARG159
|
2.3
|
11.0
|
0.4
|
|
H
|
A:ARG159
|
2.4
|
11.1
|
0.6
|
|
O
|
A:HOH517
|
2.6
|
23.7
|
1.0
|
|
HE
|
A:ARG158
|
2.9
|
13.9
|
0.4
|
|
HB3
|
A:ARG158
|
3.0
|
11.7
|
0.6
|
|
HB3
|
A:ARG158
|
3.1
|
9.6
|
0.4
|
|
N
|
A:ARG159
|
3.2
|
9.2
|
0.4
|
|
N
|
A:ARG159
|
3.2
|
9.2
|
0.6
|
|
HA
|
A:ARG159
|
3.2
|
9.8
|
0.6
|
|
HA
|
A:ARG159
|
3.3
|
9.9
|
0.4
|
|
HG3
|
A:ARG159
|
3.4
|
13.2
|
0.4
|
|
HH11
|
A:ARG158
|
3.4
|
19.2
|
0.4
|
|
HG2
|
A:ARG159
|
3.5
|
13.2
|
0.4
|
|
O
|
A:HOH518
|
3.6
|
43.9
|
1.0
|
|
HG2
|
A:ARG159
|
3.6
|
12.8
|
0.6
|
|
NE
|
A:ARG158
|
3.6
|
11.6
|
0.4
|
|
HG3
|
A:ARG159
|
3.7
|
12.8
|
0.6
|
|
CA
|
A:ARG159
|
3.7
|
8.2
|
0.6
|
|
CA
|
A:ARG159
|
3.7
|
8.2
|
0.4
|
|
CG
|
A:ARG159
|
3.9
|
11.0
|
0.4
|
|
OE1
|
A:GLU162
|
3.9
|
17.8
|
1.0
|
|
CB
|
A:ARG158
|
3.9
|
9.8
|
0.6
|
|
CB
|
A:ARG158
|
4.0
|
8.0
|
0.4
|
|
CG
|
A:ARG159
|
4.0
|
10.7
|
0.6
|
|
NH1
|
A:ARG158
|
4.0
|
16.0
|
0.4
|
|
HA
|
A:ARG158
|
4.1
|
10.1
|
0.6
|
|
HA
|
A:ARG158
|
4.1
|
10.0
|
0.4
|
|
C
|
A:ARG158
|
4.2
|
8.3
|
0.4
|
|
C
|
A:ARG158
|
4.2
|
8.6
|
0.6
|
|
CZ
|
A:ARG158
|
4.2
|
10.5
|
0.4
|
|
CA
|
A:ARG158
|
4.3
|
8.4
|
0.6
|
|
CA
|
A:ARG158
|
4.3
|
8.4
|
0.4
|
|
HG2
|
A:ARG158
|
4.4
|
11.5
|
0.6
|
|
HD2
|
A:ARG158
|
4.4
|
10.9
|
0.4
|
|
CB
|
A:ARG159
|
4.5
|
9.4
|
0.4
|
|
CD
|
A:ARG158
|
4.5
|
9.1
|
0.4
|
|
CB
|
A:ARG159
|
4.5
|
9.3
|
0.6
|
|
HB2
|
A:ARG158
|
4.5
|
11.7
|
0.6
|
|
HB2
|
A:ARG158
|
4.5
|
9.6
|
0.4
|
|
CG
|
A:ARG158
|
4.7
|
9.5
|
0.6
|
|
HH12
|
A:ARG158
|
4.8
|
19.2
|
0.4
|
|
HD2
|
A:ARG158
|
4.8
|
11.9
|
0.6
|
|
CG
|
A:ARG158
|
4.8
|
8.8
|
0.4
|
|
HB3
|
A:GLU162
|
4.9
|
11.0
|
1.0
|
|
C
|
A:ARG159
|
4.9
|
9.0
|
0.6
|
|
C
|
A:ARG159
|
5.0
|
9.2
|
0.4
|
|
Chlorine binding site 8 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 8 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl208
b:18.4
occ:0.94
|
HE
|
A:ARG159
|
2.4
|
14.4
|
0.6
|
|
HH21
|
A:ARG159
|
2.7
|
21.2
|
0.4
|
|
O
|
A:HOH492
|
3.0
|
19.4
|
0.5
|
|
O
|
A:HOH510
|
3.1
|
42.7
|
1.0
|
|
NE
|
A:ARG159
|
3.2
|
12.0
|
0.6
|
|
HH21
|
A:ARG159
|
3.3
|
15.4
|
0.6
|
|
HD2
|
A:ARG159
|
3.4
|
20.4
|
0.4
|
|
NH2
|
A:ARG159
|
3.5
|
17.6
|
0.4
|
|
HD3
|
A:ARG159
|
3.6
|
20.4
|
0.4
|
|
HD2
|
A:ARG159
|
3.7
|
16.4
|
0.6
|
|
HH22
|
A:ARG159
|
3.8
|
21.2
|
0.4
|
|
CD
|
A:ARG159
|
3.9
|
17.0
|
0.4
|
|
O
|
A:HOH310
|
4.0
|
40.4
|
1.0
|
|
NH2
|
A:ARG159
|
4.0
|
12.8
|
0.6
|
|
CZ
|
A:ARG159
|
4.0
|
12.8
|
0.6
|
|
CD
|
A:ARG159
|
4.0
|
13.7
|
0.6
|
|
CZ
|
A:ARG159
|
4.6
|
15.0
|
0.4
|
|
HG3
|
A:ARG159
|
4.6
|
12.8
|
0.6
|
|
HE
|
A:ARG158
|
4.7
|
13.0
|
0.6
|
|
HH21
|
A:ARG158
|
4.7
|
11.7
|
0.6
|
|
NE
|
A:ARG159
|
4.7
|
17.4
|
0.4
|
|
HD3
|
A:ARG159
|
4.8
|
16.4
|
0.6
|
|
HH22
|
A:ARG159
|
4.8
|
15.4
|
0.6
|
|
HG3
|
A:ARG159
|
4.9
|
13.2
|
0.4
|
|
CG
|
A:ARG159
|
5.0
|
10.7
|
0.6
|
|
Chlorine binding site 9 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 9 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl209
b:28.0
occ:0.60
|
HG2
|
A:LYS153
|
2.8
|
10.6
|
1.0
|
|
HG3
|
A:PRO157
|
2.9
|
11.9
|
1.0
|
|
O
|
A:HOH478
|
2.9
|
31.8
|
1.0
|
|
HD3
|
A:PRO157
|
3.2
|
11.3
|
1.0
|
|
HE2
|
A:LYS153
|
3.3
|
16.1
|
1.0
|
|
O
|
A:HOH375
|
3.4
|
21.8
|
1.0
|
|
CG
|
A:LYS153
|
3.7
|
8.9
|
1.0
|
|
CG
|
A:PRO157
|
3.7
|
9.9
|
1.0
|
|
HD22
|
A:LEU94
|
3.8
|
14.6
|
1.0
|
|
HD21
|
A:LEU94
|
3.8
|
14.6
|
1.0
|
|
CD
|
A:PRO157
|
3.8
|
9.4
|
1.0
|
|
HD3
|
A:LYS153
|
3.9
|
13.7
|
1.0
|
|
HB3
|
A:LYS153
|
3.9
|
10.2
|
1.0
|
|
HA
|
A:LYS153
|
4.1
|
10.0
|
1.0
|
|
HD2
|
A:PRO157
|
4.1
|
11.3
|
1.0
|
|
CD
|
A:LYS153
|
4.1
|
11.4
|
1.0
|
|
CE
|
A:LYS153
|
4.1
|
13.4
|
1.0
|
|
CD2
|
A:LEU94
|
4.1
|
12.2
|
1.0
|
|
HD23
|
A:LEU94
|
4.2
|
14.6
|
1.0
|
|
CB
|
A:LYS153
|
4.3
|
8.4
|
1.0
|
|
HG2
|
A:PRO157
|
4.3
|
11.9
|
1.0
|
|
HG3
|
A:LYS153
|
4.4
|
10.6
|
1.0
|
|
HB3
|
A:PRO157
|
4.4
|
10.9
|
1.0
|
|
HH12
|
A:ARG158
|
4.5
|
14.1
|
0.6
|
|
O
|
A:HOH491
|
4.5
|
32.6
|
1.0
|
|
HE3
|
A:LYS153
|
4.6
|
16.1
|
1.0
|
|
CB
|
A:PRO157
|
4.7
|
9.1
|
1.0
|
|
CA
|
A:LYS153
|
4.7
|
8.3
|
1.0
|
|
O
|
A:HOH499
|
4.7
|
41.1
|
1.0
|
|
Chlorine binding site 10 out
of 10 in 6lbd
Go back to
Chlorine Binding Sites List in 6lbd
Chlorine binding site 10 out
of 10 in the Shrimp Ferritin T158R G159R
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Shrimp Ferritin T158R G159R within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl210
b:58.2
occ:1.00
|
HE
|
A:ARG76
|
2.3
|
19.7
|
1.0
|
|
NE
|
A:ARG76
|
3.1
|
16.4
|
1.0
|
|
HH21
|
A:ARG76
|
3.3
|
18.1
|
1.0
|
|
O
|
A:HOH338
|
3.4
|
24.8
|
1.0
|
|
HG3
|
A:ARG76
|
3.4
|
16.6
|
1.0
|
|
HG2
|
A:ARG76
|
3.9
|
16.6
|
1.0
|
|
NH2
|
A:ARG76
|
3.9
|
15.1
|
1.0
|
|
CZ
|
A:ARG76
|
3.9
|
14.1
|
1.0
|
|
CG
|
A:ARG76
|
3.9
|
13.8
|
1.0
|
|
CD
|
A:ARG76
|
3.9
|
13.7
|
1.0
|
|
HD2
|
A:ARG76
|
4.1
|
16.4
|
1.0
|
|
HB2
|
A:SER3
|
4.2
|
17.9
|
1.0
|
|
H
|
A:SER3
|
4.5
|
22.1
|
1.0
|
|
O
|
A:HOH339
|
4.6
|
49.8
|
1.0
|
|
O
|
A:HOH450
|
4.6
|
26.1
|
1.0
|
|
HH22
|
A:ARG76
|
4.6
|
18.1
|
1.0
|
|
HA
|
A:SER3
|
4.7
|
17.5
|
1.0
|
|
N
|
A:SER3
|
4.7
|
18.4
|
1.0
|
|
HD3
|
A:ARG76
|
4.8
|
16.4
|
1.0
|
|
O
|
A:HOH579
|
5.0
|
30.5
|
1.0
|
|
Reference:
G.Zhao,
H.Chen,
T.Zhang.
Shrimp Ferritin T158R G159R To Be Published.
Page generated: Sat Dec 12 13:16:21 2020
|
