Chlorine in PDB 6lcn: Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A
Enzymatic activity of Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A
All present enzymatic activity of Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A:
2.3.1.30;
Protein crystallography data
The structure of Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A, PDB code: 6lcn
was solved by
N.Kumar,
R.P.Singh,
A.K.Singh,
S.Kumaran,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
47.60 /
2.15
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
84.719,
113.165,
230.133,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
18.7 /
22.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A
(pdb code 6lcn). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A, PDB code: 6lcn:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 6lcn
Go back to
Chlorine Binding Sites List in 6lcn
Chlorine binding site 1 out
of 3 in the Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl403
b:82.9
occ:1.00
|
O
|
A:HOH571
|
2.9
|
45.7
|
1.0
|
O
|
A:ILE216
|
2.9
|
31.4
|
1.0
|
O
|
A:ASP195
|
3.2
|
30.2
|
1.0
|
OD1
|
A:ASP195
|
3.3
|
36.3
|
1.0
|
CE1
|
E:HIS210
|
3.5
|
36.9
|
1.0
|
N
|
A:HIS197
|
3.5
|
29.8
|
1.0
|
C
|
A:ILE216
|
3.6
|
30.8
|
1.0
|
CG1
|
A:VAL215
|
3.6
|
25.5
|
1.0
|
CG
|
A:ASP195
|
3.7
|
32.2
|
1.0
|
ND1
|
E:HIS210
|
3.8
|
32.9
|
1.0
|
N
|
A:ILE216
|
3.8
|
29.8
|
1.0
|
C
|
A:ASP195
|
3.9
|
32.7
|
1.0
|
O
|
A:HOH607
|
4.0
|
40.4
|
1.0
|
CB
|
A:HIS197
|
4.0
|
25.6
|
1.0
|
OD2
|
A:ASP195
|
4.0
|
31.6
|
1.0
|
C
|
A:ILE196
|
4.1
|
31.4
|
1.0
|
CA
|
A:HIS197
|
4.2
|
28.3
|
1.0
|
N
|
A:GLY217
|
4.3
|
29.1
|
1.0
|
CA
|
A:GLY217
|
4.3
|
27.8
|
1.0
|
CA
|
A:ILE196
|
4.4
|
28.7
|
1.0
|
CA
|
A:ILE216
|
4.4
|
29.0
|
1.0
|
N
|
A:ILE196
|
4.4
|
30.8
|
1.0
|
CB
|
A:ASP195
|
4.4
|
30.9
|
1.0
|
C
|
A:VAL215
|
4.6
|
31.8
|
1.0
|
NE2
|
E:HIS210
|
4.6
|
38.6
|
1.0
|
CA
|
A:VAL215
|
4.7
|
27.6
|
1.0
|
O
|
A:HOH583
|
4.7
|
36.2
|
1.0
|
CB
|
A:VAL215
|
4.8
|
27.6
|
1.0
|
CA
|
A:ASP195
|
4.8
|
29.9
|
1.0
|
O
|
A:HOH573
|
4.8
|
24.7
|
1.0
|
O
|
A:ILE196
|
5.0
|
34.2
|
1.0
|
CG
|
A:HIS197
|
5.0
|
26.9
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 6lcn
Go back to
Chlorine Binding Sites List in 6lcn
Chlorine binding site 2 out
of 3 in the Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl603
b:65.7
occ:1.00
|
OG1
|
C:THR185
|
2.9
|
23.9
|
1.0
|
O
|
C:ILE196
|
3.0
|
18.9
|
1.0
|
OD1
|
C:ASP195
|
3.2
|
27.4
|
1.0
|
OE2
|
C:GLU186
|
3.2
|
28.5
|
1.0
|
O
|
C:HOH790
|
3.2
|
43.1
|
1.0
|
CB
|
C:THR185
|
3.4
|
24.6
|
1.0
|
CD
|
C:GLU186
|
3.5
|
25.7
|
1.0
|
NE
|
C:ARG182
|
3.6
|
26.4
|
1.0
|
C
|
C:ILE196
|
3.6
|
20.4
|
1.0
|
C
|
C:THR185
|
3.8
|
24.9
|
1.0
|
CD
|
C:ARG182
|
3.9
|
25.2
|
1.0
|
N
|
C:GLU186
|
4.0
|
22.3
|
1.0
|
N
|
C:ILE196
|
4.0
|
22.1
|
1.0
|
O
|
C:THR185
|
4.0
|
24.7
|
1.0
|
CG
|
C:GLU186
|
4.0
|
24.6
|
1.0
|
OE1
|
C:GLU186
|
4.0
|
25.4
|
1.0
|
N
|
C:HIS197
|
4.1
|
21.8
|
1.0
|
O
|
C:HOH761
|
4.1
|
19.5
|
1.0
|
CA
|
C:HIS197
|
4.2
|
24.0
|
1.0
|
CA
|
C:THR185
|
4.2
|
25.1
|
1.0
|
CG
|
C:ASP195
|
4.4
|
26.3
|
1.0
|
CA
|
C:GLU186
|
4.4
|
22.9
|
1.0
|
C
|
C:ASP195
|
4.5
|
22.6
|
1.0
|
CA
|
C:ILE196
|
4.5
|
21.5
|
1.0
|
CZ
|
C:ARG182
|
4.5
|
27.9
|
1.0
|
CD
|
C:PRO198
|
4.5
|
24.9
|
1.0
|
CG2
|
C:THR185
|
4.6
|
23.0
|
1.0
|
O
|
C:HOH730
|
4.7
|
23.4
|
1.0
|
CA
|
C:ASP195
|
4.7
|
22.1
|
1.0
|
O
|
C:HOH792
|
4.8
|
34.0
|
1.0
|
NH2
|
C:ARG182
|
4.8
|
25.6
|
1.0
|
CB
|
C:GLU186
|
4.9
|
24.2
|
1.0
|
CB
|
C:HIS189
|
4.9
|
22.2
|
1.0
|
O
|
C:ARG182
|
5.0
|
23.9
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 6lcn
Go back to
Chlorine Binding Sites List in 6lcn
Chlorine binding site 3 out
of 3 in the Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Serine Acetyltransferase From Planctomyces Limnophilus at 2.15A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl403
b:54.4
occ:1.00
|
O
|
D:HOH569
|
2.8
|
28.0
|
1.0
|
C
|
D:GLY159
|
3.0
|
22.0
|
1.0
|
N
|
D:ILE208
|
3.0
|
24.9
|
1.0
|
O
|
D:GLY159
|
3.1
|
26.1
|
1.0
|
N
|
D:LEU160
|
3.4
|
21.8
|
1.0
|
CA
|
D:GLY159
|
3.5
|
20.3
|
1.0
|
CA
|
D:PHE207
|
3.5
|
27.3
|
1.0
|
CD1
|
D:PHE207
|
3.7
|
29.8
|
1.0
|
C
|
D:PHE207
|
3.8
|
27.2
|
1.0
|
CG2
|
D:VAL163
|
3.8
|
25.4
|
1.0
|
CA
|
D:LEU160
|
3.8
|
22.5
|
1.0
|
O
|
D:ILE208
|
3.9
|
24.4
|
1.0
|
O
|
D:PHE206
|
4.0
|
25.9
|
1.0
|
CA
|
D:ILE208
|
4.0
|
23.5
|
1.0
|
CB
|
D:ILE208
|
4.2
|
23.3
|
1.0
|
C
|
D:ILE208
|
4.4
|
24.3
|
1.0
|
CB
|
D:PHE207
|
4.4
|
27.6
|
1.0
|
N
|
D:PHE207
|
4.4
|
27.8
|
1.0
|
CB
|
D:VAL163
|
4.5
|
25.4
|
1.0
|
CE1
|
D:PHE207
|
4.5
|
28.8
|
1.0
|
CG
|
D:PHE207
|
4.5
|
30.5
|
1.0
|
C
|
D:PHE206
|
4.6
|
26.9
|
1.0
|
CB
|
D:LEU160
|
4.7
|
22.3
|
1.0
|
N
|
D:GLY159
|
4.7
|
21.6
|
1.0
|
CG1
|
D:ILE208
|
4.8
|
19.8
|
1.0
|
O
|
D:PHE207
|
5.0
|
29.2
|
1.0
|
C
|
D:LEU160
|
5.0
|
24.3
|
1.0
|
|
Reference:
N.Kumar,
R.P.Singh,
S.Kumaran.
Understanding Mechanics of Competitive-Allostery Using Engineered Cysteine Synthase Assembly To Be Published.
Page generated: Sun Jul 28 02:44:02 2024
|