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Chlorine in PDB 6lkw: Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum

Protein crystallography data

The structure of Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum, PDB code: 6lkw was solved by Z.M.Su, X.Y.Tian, H.J.Li, Z.M.Wei, L.F.Chen, H.X.Ren, W.F.Peng, C.T.Tang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.95 / 3.20
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 172.842, 172.842, 172.842, 90.00, 90.00, 90.00
R / Rfree (%) 23 / 33.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum (pdb code 6lkw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum, PDB code: 6lkw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6lkw

Go back to Chlorine Binding Sites List in 6lkw
Chlorine binding site 1 out of 2 in the Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:36.3
occ:0.33
NH2 A:ARG98 3.2 34.1 1.0
O A:HOH335 3.8 18.9 0.3
NH1 A:ARG98 3.8 31.4 1.0
CZ A:ARG98 3.9 32.9 1.0
O A:HOH323 4.3 32.4 1.0
CG2 A:ILE100 4.5 36.9 1.0
CD1 A:ILE100 4.9 38.4 1.0
CG1 A:ILE100 5.0 36.5 1.0

Chlorine binding site 2 out of 2 in 6lkw

Go back to Chlorine Binding Sites List in 6lkw
Chlorine binding site 2 out of 2 in the Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:38.5
occ:1.00
NH2 C:ARG98 2.7 48.2 1.0
NH2 B:ARG98 3.1 49.1 1.0
NH1 B:ARG98 3.4 46.4 1.0
CZ B:ARG98 3.7 50.0 1.0
CZ C:ARG98 3.7 52.2 1.0
NH2 D:ARG98 3.8 69.6 1.0
NH1 C:ARG98 3.9 59.7 1.0
NH1 D:ARG98 4.1 78.6 1.0
CG2 B:ILE100 4.1 47.2 1.0
CG2 D:ILE100 4.3 86.1 1.0
CZ D:ARG98 4.4 73.4 1.0
CG1 B:ILE100 4.5 56.1 1.0
CD1 B:ILE100 4.7 61.2 1.0
CG2 C:ILE100 4.8 76.6 1.0
O C:HOH215 4.8 15.9 1.0
NE C:ARG98 4.9 47.9 1.0
NE B:ARG98 4.9 56.0 1.0
CB B:ILE100 5.0 50.3 1.0
CG1 C:ILE100 5.0 72.4 1.0

Reference:

Z.Su, X.Tian, H.Li, Z.Wei, L.Chen, S.Wang, H.Ren, W.Peng, C.Tang, T.Lin, S.Huang. Structural and Functional Insights Into Macrophage Migration Inhibitory Factor From Oncomelania Hupensis, the Intermediate Host of Schistosoma Japonicum. Biochem.J. V. 477 2133 2020.
ISSN: ESSN 1470-8728
PubMed: 32484230
DOI: 10.1042/BCJ20200068
Page generated: Sat Jul 12 16:35:13 2025

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