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Chlorine in PDB 6m2r: X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form

Protein crystallography data

The structure of X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form, PDB code: 6m2r was solved by P.Shabareesh, A.K.Mallela, D.Joseph, A.Penmatsa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.40 / 2.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 96.8, 141.27, 167.711, 90, 90, 90
R / Rfree (%) 21.1 / 24.7

Other elements in 6m2r:

The structure of X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form also contains other interesting chemical elements:

Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form (pdb code 6m2r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form, PDB code: 6m2r:

Chlorine binding site 1 out of 1 in 6m2r

Go back to Chlorine Binding Sites List in 6m2r
Chlorine binding site 1 out of 1 in the X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of A Functional Drosophila Dopamine Transporter in L- Norepinephrine Bound Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl705

b:55.6
occ:1.00
OG A:SER320 3.0 56.2 1.0
OG A:SER356 3.1 60.1 1.0
OH A:TYR69 3.2 55.0 1.0
NE2 A:GLN316 3.2 60.6 1.0
CB A:SER320 3.5 55.4 1.0
CB A:SER356 3.8 56.7 1.0
CD1 A:PHE53 3.9 53.9 1.0
CB A:PHE53 4.0 55.9 1.0
CG A:GLN316 4.0 56.3 1.0
CD A:GLN316 4.1 58.7 1.0
CZ A:TYR69 4.1 60.5 1.0
CG A:PHE53 4.2 57.9 1.0
CE1 A:TYR69 4.3 54.7 1.0
ND2 A:ASN49 4.4 55.1 1.0
ND2 A:ASN352 4.5 52.3 1.0
NA A:NA706 4.8 65.7 1.0
CE1 A:PHE53 4.8 55.4 1.0
OG A:SER353 4.9 60.8 1.0
O A:GLN316 4.9 61.6 1.0
CA A:SER320 5.0 59.1 1.0

Reference:

P.Shabareesh, A.K.Mallela, D.Joseph. Structural Basis of Norepinephrine Recognition and Transport Inhibition in Neurotransmitter Transporters To Be Published.
Page generated: Sun Jul 28 03:00:50 2024

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