Chlorine in PDB 6m83: Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol

Enzymatic activity of Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol

All present enzymatic activity of Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol:
2.1.1.235;

Protein crystallography data

The structure of Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol, PDB code: 6m83 was solved by R.J.Fick, B.G.Mcdole, R.C.Trievel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.00 / 1.37
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 64.521, 91.267, 93.629, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 18.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol (pdb code 6m83). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol, PDB code: 6m83:

Chlorine binding site 1 out of 1 in 6m83

Go back to Chlorine Binding Sites List in 6m83
Chlorine binding site 1 out of 1 in the Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of TYLM1 S120A Bound to Sah and Dtdp-Phenol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:17.3
occ:1.00
N A:ASP200 3.2 10.6 1.0
N A:ARG201 3.3 11.5 1.0
O A:HOH498 3.3 25.5 1.0
N A:PRO199 3.5 10.2 1.0
C A:GLY198 3.6 10.0 1.0
CA A:GLY198 3.7 10.1 1.0
CD A:PRO199 3.7 11.2 1.0
CB A:ASP200 3.8 14.3 1.0
CA A:ASP200 3.9 11.6 1.0
CB A:ARG201 3.9 14.1 1.0
C A:ASP200 4.0 11.5 1.0
C A:PRO199 4.1 11.8 1.0
O A:GLY198 4.2 10.5 1.0
CA A:ARG201 4.2 11.2 1.0
CA A:PRO199 4.3 10.3 1.0
CB A:PRO199 4.6 12.2 1.0
N A:GLY198 4.7 9.4 1.0
CG A:ASP200 4.7 16.7 1.0
CG A:PRO199 4.8 13.1 1.0
O A:GLY172 4.9 18.7 1.0
OD2 A:ASP200 5.0 19.6 1.0

Reference:

R.J.Fick, S.Horowitz, B.G.Mcdole, M.C.Clay, R.A.Mehl, H.M.Al-Hashimi, S.Scheiner, R.C.Trievel. Structural and Functional Characterization of Sulfonium Carbon-Oxygen Hydrogen Bonding in the Deoxyamino Sugar Methyltransferase TYLM1. Biochemistry V. 58 2152 2019.
ISSN: ISSN 0006-2960
PubMed: 30810306
DOI: 10.1021/ACS.BIOCHEM.8B01141
Page generated: Sat Dec 12 13:20:38 2020

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