Chlorine in PDB 6mqa: Structure of Hiv-1 Ca P207S

The structure of Structure of Hiv-1 Ca P207S, PDB code: 6mqa was solved by S.S.Smaga, Y.Xiong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.33 / 3.20
Space group	P 6
Cell size a, b, c (Å), α, β, γ (°)	90.237, 90.237, 57.534, 90.00, 90.00, 120.00
R / Rfree (%)	18.6 / 21.9

The structure of Structure of Hiv-1 Ca P207S also contains other interesting chemical elements:

Iodine

(I)

3 atoms

The binding sites of Chlorine atom in the Structure of Hiv-1 Ca P207S (pdb code 6mqa). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Hiv-1 Ca P207S, PDB code: 6mqa:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of Hiv-1 Ca P207S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Hiv-1 Ca P207S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl304 b:48.0 occ:1.00 CG2 A:ILE37 3.8 62.8 1.0 CA A:PRO38 4.1 58.6 1.0 N A:PRO38 4.1 58.5 1.0 O A:ILE37 4.2 68.2 1.0 C A:ILE37 4.3 60.7 1.0 CB A:SER41 4.3 51.8 1.0 CG A:PRO38 4.5 61.3 1.0 CD A:PRO38 4.5 52.7 1.0 CD1 A:ILE135 4.6 57.7 1.0 CG2 A:ILE135 4.6 43.5 1.0 CB A:PRO38 4.7 56.9 1.0 CB A:ILE37 4.7 65.7 1.0 OG A:SER41 4.7 69.0 1.0 O A:HOH403 4.8 29.0 1.0

Chlorine binding site 2 out of 2 in the Structure of Hiv-1 Ca P207S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Hiv-1 Ca P207S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl305 b:44.9 occ:1.00 CE A:LYS182 3.4 71.6 1.0 NZ A:LYS182 3.6 75.9 1.0 CD A:LYS182 3.6 75.4 1.0 CA A:ARG173 3.8 55.5 1.0 CD2 A:LEU172 4.0 45.7 1.0 N A:ARG173 4.0 58.6 1.0 CG A:LEU172 4.1 35.2 1.0 C A:LEU172 4.3 54.0 1.0 O A:LEU172 4.4 58.9 1.0 CB A:ARG173 4.4 50.7 1.0 CB A:LEU172 4.5 56.7 1.0 O A:TYR169 4.6 47.3 1.0 CG A:ARG173 4.6 47.0 1.0 CG A:LYS182 4.7 79.1 1.0 CD1 A:TYR169 5.0 52.6 1.0

S.S.Smaga, C.Xu, B.J.Summers, K.M.Digianantonio, J.R.Perilla, Y.Xiong. Mxb Restricts Hiv-1 By Targeting the Tri-Hexamer Interface of the Viral Capsid. Structure V. 27 1234 2019.
ISSN: ISSN 0969-2126
PubMed: 31155311
DOI: 10.1016/J.STR.2019.04.015