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Chlorine in PDB 6muz: Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography

Enzymatic activity of Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography

All present enzymatic activity of Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography:
3.2.1.17;

Protein crystallography data

The structure of Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography, PDB code: 6muz was solved by A.D.Finke, J.L.Wierman, O.Pare-Labrosse, A.Sarrachini, J.Besaw, I.Kriksunov, S.M.Gruner, R.J.D.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.55 / 1.84
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.100, 79.100, 38.020, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 20.4

Other elements in 6muz:

The structure of Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography (pdb code 6muz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography, PDB code: 6muz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6muz

Go back to Chlorine Binding Sites List in 6muz
Chlorine binding site 1 out of 2 in the Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:29.2
occ:1.00
OH A:TYR23 3.0 18.4 1.0
CZ A:TYR23 3.7 18.7 1.0
CE2 A:TYR23 3.7 17.7 1.0
CA A:GLY104 4.1 14.6 1.0
O A:HOH314 4.5 32.5 1.0
O A:ARG21 4.7 28.4 1.0
N A:GLY104 4.7 16.0 1.0
CE1 A:TYR23 4.9 18.6 1.0
CD2 A:TYR23 4.9 15.6 1.0

Chlorine binding site 2 out of 2 in 6muz

Go back to Chlorine Binding Sites List in 6muz
Chlorine binding site 2 out of 2 in the Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Lysozyme, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:35.9
occ:1.00
N A:GLY26 3.0 15.2 1.0
OG A:SER24 3.1 25.4 1.0
CB A:SER24 3.4 22.9 1.0
CA A:GLY26 3.4 15.7 1.0
CA A:GLN121 3.7 26.9 1.0
CD1 A:ILE124 3.8 36.7 1.0
N A:LEU25 3.9 17.9 1.0
N A:GLN121 4.0 24.4 1.0
CB A:GLN121 4.1 39.0 1.0
C A:SER24 4.1 21.5 1.0
C A:LEU25 4.2 15.1 1.0
CG A:GLN121 4.3 57.4 1.0
CG1 A:ILE124 4.3 28.1 1.0
O A:VAL120 4.4 24.3 1.0
C A:VAL120 4.4 25.5 1.0
CA A:SER24 4.4 23.7 1.0
CG2 A:VAL120 4.5 23.9 1.0
CA A:LEU25 4.5 18.7 1.0
C A:GLY26 4.5 18.2 1.0
O A:SER24 4.6 18.9 1.0
N A:ASN27 4.7 14.6 1.0
C A:GLN121 4.8 28.9 1.0
CB A:LEU25 4.9 15.8 1.0

Reference:

J.L.Wierman, O.Pare-Labrosse, A.Sarracini, J.E.Besaw, M.J.Cook, S.Oghbaey, H.Daoud, P.Mehrabi, I.Kriksunov, A.Kuo, D.J.Schuller, S.Smith, O.P.Ernst, D.M.E.Szebenyi, S.M.Gruner, R.J.D.Miller, A.D.Finke. Fixed-Target Serial Oscillation Crystallography at Room Temperature. Iucrj V. 6 305 2019.
ISSN: ESSN 2052-2525
PubMed: 30867928
DOI: 10.1107/S2052252519001453
Page generated: Sun Jul 28 03:25:23 2024

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