Chlorine in PDB 6myr: Avian Mitochondrial Complex II with Thiapronil Bound

Enzymatic activity of Avian Mitochondrial Complex II with Thiapronil Bound

All present enzymatic activity of Avian Mitochondrial Complex II with Thiapronil Bound:
1.3.5.1;

Protein crystallography data

The structure of Avian Mitochondrial Complex II with Thiapronil Bound, PDB code: 6myr was solved by L.-S.Huang, P.Luemmen, E.A.Berry, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.93 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 72.361, 84.622, 293.337, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 23.8

Other elements in 6myr:

The structure of Avian Mitochondrial Complex II with Thiapronil Bound also contains other interesting chemical elements:

Potassium (K) 1 atom
Iron (Fe) 10 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Avian Mitochondrial Complex II with Thiapronil Bound (pdb code 6myr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Avian Mitochondrial Complex II with Thiapronil Bound, PDB code: 6myr:

Chlorine binding site 1 out of 1 in 6myr

Go back to Chlorine Binding Sites List in 6myr
Chlorine binding site 1 out of 1 in the Avian Mitochondrial Complex II with Thiapronil Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Avian Mitochondrial Complex II with Thiapronil Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl202

b:57.6
occ:1.00
CL7 C:K7G202 0.0 57.6 1.0
C02 C:K7G202 1.8 54.7 1.0
C03 C:K7G202 2.8 53.3 1.0
C01 C:K7G202 2.8 52.5 1.0
O23 C:K7G202 3.0 54.1 1.0
C08 C:K7G202 3.1 52.4 1.0
OH D:TYR58 3.8 48.4 1.0
CD1 B:TRP173 3.9 52.0 1.0
OG B:SER170 3.9 54.4 1.0
NE1 B:TRP173 4.0 53.0 1.0
C04 C:K7G202 4.1 51.2 1.0
C06 C:K7G202 4.1 50.6 1.0
NH1 C:ARG43 4.1 50.4 1.0
OD2 D:ASP57 4.1 50.4 1.0
O B:HOH1132 4.2 46.5 1.0
CE1 D:TYR58 4.2 51.3 1.0
CD1 B:ILE218 4.2 51.2 1.0
C09 C:K7G202 4.2 51.1 1.0
CD2 B:HIS216 4.3 46.3 1.0
CZ D:TYR58 4.3 54.8 1.0
N B:SER170 4.4 48.5 1.0
CG D:ASP57 4.4 53.3 1.0
CB B:PRO169 4.4 46.2 1.0
CA B:SER170 4.5 50.6 1.0
C05 C:K7G202 4.6 51.7 1.0
C B:PRO169 4.6 46.8 1.0
CB D:ASP57 4.7 51.5 1.0
CB B:SER170 4.7 54.0 1.0
CZ C:ARG43 4.8 53.4 1.0
O B:PRO169 4.9 45.5 1.0
C10 C:K7G202 4.9 52.6 1.0
OD1 D:ASP57 5.0 53.2 1.0

Reference:

L.-S.Huang, E.A.Berry. Crystallographic Studies of the Binding of Ligands to the Ubiquinone Site of Mitochondrial Respiratory Complex II To Be Published.
Page generated: Sat Dec 12 13:22:25 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy