Chlorine in PDB 6myt: Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket

All present enzymatic activity of Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket:
1.3.5.1;

The structure of Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket, PDB code: 6myt was solved by E.A.Berry, L.-S.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.19 / 2.27
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	69.992, 83.817, 290.344, 90.00, 90.00, 90.00
R / Rfree (%)	22.6 / 26

The structure of Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket also contains other interesting chemical elements:

Potassium	(K)	1 atom
Manganese	(Mn)	1 atom
Iron	(Fe)	10 atoms

The binding sites of Chlorine atom in the Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket (pdb code 6myt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket, PDB code: 6myt:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl202 b:0.8 occ:1.00 CL12 C:AT5202 0.0 0.8 1.0 C13 C:AT5202 1.8 0.2 1.0 C11 C:AT5202 2.7 1.0 1.0 C14 C:AT5202 2.7 0.1 1.0 C12 C:AT5202 2.7 0.3 1.0 CZ3 B:TRP172 3.3 52.1 1.0 O5 C:AT5202 3.5 69.7 1.0 CE3 B:TRP172 3.5 49.9 1.0 CL16 C:AT5202 3.6 0.6 1.0 CB B:PRO169 3.7 48.4 1.0 C8 C:AT5202 3.7 87.5 1.0 CG B:PRO169 3.8 47.5 1.0 CE C:MET36 3.8 66.2 1.0 C7 C:AT5202 3.8 70.3 1.0 CZ2 B:TRP173 3.9 48.3 1.0 C17 C:AT5202 4.0 0.8 1.0 CH2 B:TRP172 4.2 52.7 1.0 CH2 B:TRP173 4.4 52.5 1.0 CA B:PRO169 4.5 42.4 1.0 CD2 B:TRP172 4.6 44.8 1.0 O1 C:AT5202 4.7 53.2 1.0 CG1 C:ILE27 4.8 65.0 1.0 CE2 B:TRP173 4.8 49.6 1.0 C6 C:AT5202 4.9 58.1 1.0

Chlorine binding site 2 out of 2 in the Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Avian Mitochondrial Complex II with Atpenin A5 Bound, Sidechain in Pocket within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl202 b:0.6 occ:1.00 CL16 C:AT5202 0.0 0.6 1.0 C14 C:AT5202 1.8 0.1 1.0 C13 C:AT5202 2.7 0.2 1.0 CA C:ILE27 3.6 66.1 1.0 O C:ILE27 3.6 61.1 1.0 CL12 C:AT5202 3.6 0.8 1.0 O C:HIS26 4.0 66.5 1.0 C C:ILE27 4.0 63.6 1.0 C12 C:AT5202 4.0 0.3 1.0 CE C:MET36 4.1 66.2 1.0 CZ3 B:TRP172 4.1 52.1 1.0 CZ2 C:TRP32 4.1 52.0 1.0 NE1 C:TRP32 4.2 57.6 1.0 CE2 C:TRP32 4.2 53.6 1.0 CB C:TYR30 4.2 47.2 1.0 C17 C:AT5202 4.3 0.8 1.0 CB C:ILE27 4.3 68.1 1.0 CG1 C:ILE27 4.4 65.0 1.0 CH2 B:TRP172 4.4 52.7 1.0 CG2 C:ILE27 4.4 76.0 1.0 N C:ILE27 4.5 66.7 1.0 C C:HIS26 4.6 65.4 1.0 O C:TYR30 4.8 50.3 1.0 CH2 C:TRP32 4.9 51.9 1.0

L.-S.Huang, E.A.Berry. Crystallographic Studies of the Binding of Ligands to the Ubiquinone Site of Mitochondrial Respiratory Complex II To Be Published.