Chlorine in PDB 6nb1: Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Enzymatic activity of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
All present enzymatic activity of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06:
3.4.21.92;
Protein crystallography data
The structure of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06, PDB code: 6nb1
was solved by
M.F.Mabanglo,
W.A.Houry,
B.T.Eger,
S.Bryson,
E.F.Pai,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
48.00 /
1.90
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
190.985,
101.094,
155.194,
90.00,
98.29,
90.00
|
R / Rfree (%)
|
20.9 /
24.4
|
Other elements in 6nb1:
The structure of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 also contains other interesting chemical elements:
Chlorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
28;
Binding sites:
The binding sites of Chlorine atom in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
(pdb code 6nb1). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 28 binding sites of Chlorine where determined in the
Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06, PDB code: 6nb1:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 1 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:65.5
occ:0.48
|
CLB
|
A:KHS301
|
0.0
|
65.5
|
0.5
|
CLB
|
A:KHS301
|
0.2
|
65.6
|
0.3
|
CBB
|
A:KHS301
|
1.6
|
65.0
|
0.3
|
CBB
|
A:KHS301
|
1.7
|
65.0
|
0.5
|
CBA
|
A:KHS301
|
2.6
|
65.7
|
0.3
|
CAZ
|
A:KHS301
|
2.6
|
67.4
|
0.3
|
CBA
|
A:KHS301
|
2.7
|
65.7
|
0.5
|
CAZ
|
A:KHS301
|
2.7
|
67.4
|
0.5
|
SAV
|
A:KHS301
|
3.1
|
77.4
|
0.3
|
SAV
|
A:KHS301
|
3.2
|
77.2
|
0.5
|
CD2
|
A:LEU37
|
3.4
|
41.2
|
1.0
|
CD1
|
G:PHE63
|
3.5
|
39.6
|
1.0
|
CA
|
G:PHE63
|
3.7
|
33.1
|
1.0
|
CAW
|
A:KHS301
|
3.8
|
65.5
|
0.3
|
CAY
|
A:KHS301
|
3.9
|
63.9
|
0.3
|
CG
|
A:ARG36
|
3.9
|
46.9
|
1.0
|
CAW
|
A:KHS301
|
4.0
|
65.5
|
0.5
|
CAY
|
A:KHS301
|
4.0
|
63.7
|
0.5
|
CB
|
G:ALA66
|
4.1
|
46.3
|
1.0
|
CB
|
G:PHE63
|
4.1
|
29.1
|
1.0
|
O
|
G:PHE63
|
4.2
|
32.8
|
1.0
|
CG
|
G:PHE63
|
4.3
|
35.8
|
1.0
|
CZ
|
A:ARG36
|
4.3
|
64.1
|
1.0
|
CAX
|
A:KHS301
|
4.4
|
65.8
|
0.3
|
NH1
|
A:ARG36
|
4.4
|
60.8
|
1.0
|
CE1
|
G:PHE63
|
4.4
|
41.0
|
1.0
|
C
|
G:PHE63
|
4.5
|
28.5
|
1.0
|
CAX
|
A:KHS301
|
4.5
|
65.7
|
0.5
|
CG
|
A:GLU40
|
4.5
|
53.5
|
1.0
|
N
|
G:PHE63
|
4.5
|
30.4
|
1.0
|
NE
|
A:ARG36
|
4.5
|
56.4
|
1.0
|
CG
|
A:LEU37
|
4.6
|
34.2
|
1.0
|
O
|
G:LEU62
|
4.7
|
33.1
|
1.0
|
NH2
|
A:ARG36
|
4.7
|
65.0
|
1.0
|
CD
|
A:ARG36
|
4.8
|
50.4
|
1.0
|
O
|
A:ARG36
|
4.8
|
31.6
|
1.0
|
CAU
|
A:KHS301
|
4.9
|
65.4
|
0.3
|
C
|
G:LEU62
|
4.9
|
35.5
|
1.0
|
CB
|
A:ARG36
|
4.9
|
37.7
|
1.0
|
C
|
A:ARG36
|
4.9
|
33.7
|
1.0
|
CA
|
A:LEU37
|
5.0
|
26.0
|
1.0
|
CAU
|
A:KHS301
|
5.0
|
65.3
|
0.5
|
|
Chlorine binding site 2 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 2 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:65.6
occ:0.33
|
CLB
|
A:KHS301
|
0.0
|
65.6
|
0.3
|
CLB
|
A:KHS301
|
0.2
|
65.5
|
0.5
|
CBB
|
A:KHS301
|
1.7
|
65.0
|
0.3
|
CBB
|
A:KHS301
|
1.9
|
65.0
|
0.5
|
CBA
|
A:KHS301
|
2.7
|
65.7
|
0.3
|
CAZ
|
A:KHS301
|
2.7
|
67.4
|
0.3
|
CBA
|
A:KHS301
|
2.8
|
65.7
|
0.5
|
CAZ
|
A:KHS301
|
2.9
|
67.4
|
0.5
|
SAV
|
A:KHS301
|
3.2
|
77.4
|
0.3
|
SAV
|
A:KHS301
|
3.3
|
77.2
|
0.5
|
CD1
|
G:PHE63
|
3.4
|
39.6
|
1.0
|
CD2
|
A:LEU37
|
3.4
|
41.2
|
1.0
|
CA
|
G:PHE63
|
3.6
|
33.1
|
1.0
|
CG
|
A:ARG36
|
3.8
|
46.9
|
1.0
|
CAW
|
A:KHS301
|
4.0
|
65.5
|
0.3
|
CB
|
G:PHE63
|
4.0
|
29.1
|
1.0
|
CAY
|
A:KHS301
|
4.0
|
63.9
|
0.3
|
CAW
|
A:KHS301
|
4.1
|
65.5
|
0.5
|
O
|
G:PHE63
|
4.1
|
32.8
|
1.0
|
CG
|
G:PHE63
|
4.1
|
35.8
|
1.0
|
CB
|
G:ALA66
|
4.1
|
46.3
|
1.0
|
CAY
|
A:KHS301
|
4.1
|
63.7
|
0.5
|
CE1
|
G:PHE63
|
4.3
|
41.0
|
1.0
|
C
|
G:PHE63
|
4.3
|
28.5
|
1.0
|
CZ
|
A:ARG36
|
4.4
|
64.1
|
1.0
|
N
|
G:PHE63
|
4.4
|
30.4
|
1.0
|
NH1
|
A:ARG36
|
4.4
|
60.8
|
1.0
|
CAX
|
A:KHS301
|
4.5
|
65.8
|
0.3
|
NE
|
A:ARG36
|
4.5
|
56.4
|
1.0
|
O
|
G:LEU62
|
4.6
|
33.1
|
1.0
|
CG
|
A:LEU37
|
4.6
|
34.2
|
1.0
|
CAX
|
A:KHS301
|
4.6
|
65.7
|
0.5
|
CG
|
A:GLU40
|
4.6
|
53.5
|
1.0
|
NH2
|
A:ARG36
|
4.8
|
65.0
|
1.0
|
CD
|
A:ARG36
|
4.8
|
50.4
|
1.0
|
C
|
G:LEU62
|
4.9
|
35.5
|
1.0
|
O
|
A:ARG36
|
4.9
|
31.6
|
1.0
|
CB
|
A:ARG36
|
4.9
|
37.7
|
1.0
|
CAU
|
A:KHS301
|
5.0
|
65.4
|
0.3
|
C
|
A:ARG36
|
5.0
|
33.7
|
1.0
|
CA
|
A:LEU37
|
5.0
|
26.0
|
1.0
|
|
Chlorine binding site 3 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 3 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl301
b:92.3
occ:0.46
|
CLB
|
B:KHS301
|
0.0
|
92.3
|
0.5
|
CLB
|
B:KHS301
|
0.2
|
91.9
|
0.3
|
CBB
|
B:KHS301
|
1.6
|
79.2
|
0.3
|
CBB
|
B:KHS301
|
1.7
|
79.3
|
0.5
|
CAZ
|
B:KHS301
|
2.6
|
79.9
|
0.3
|
CBA
|
B:KHS301
|
2.6
|
80.2
|
0.3
|
CBA
|
B:KHS301
|
2.7
|
80.3
|
0.5
|
CAZ
|
B:KHS301
|
2.7
|
80.2
|
0.5
|
SAV
|
B:KHS301
|
3.0
|
94.3
|
0.3
|
SAV
|
B:KHS301
|
3.2
|
93.9
|
0.5
|
NH1
|
B:ARG36
|
3.2
|
59.0
|
1.0
|
CD2
|
B:LEU37
|
3.3
|
45.3
|
1.0
|
CZ
|
B:ARG36
|
3.6
|
59.8
|
1.0
|
CD1
|
A:PHE63
|
3.8
|
38.7
|
1.0
|
CAY
|
B:KHS301
|
3.9
|
79.1
|
0.3
|
NH2
|
B:ARG36
|
3.9
|
64.0
|
1.0
|
CAW
|
B:KHS301
|
3.9
|
79.0
|
0.3
|
CA
|
A:PHE63
|
3.9
|
35.5
|
1.0
|
CAW
|
B:KHS301
|
4.0
|
79.0
|
0.5
|
CAY
|
B:KHS301
|
4.0
|
79.1
|
0.5
|
CB
|
A:ALA66
|
4.0
|
53.2
|
1.0
|
CG
|
B:ARG36
|
4.1
|
47.4
|
1.0
|
CG
|
B:GLU40
|
4.1
|
59.2
|
1.0
|
O
|
B:ARG36
|
4.2
|
35.3
|
1.0
|
NE
|
B:ARG36
|
4.3
|
48.8
|
1.0
|
CB
|
A:PHE63
|
4.4
|
33.0
|
1.0
|
CAX
|
B:KHS301
|
4.4
|
80.2
|
0.3
|
CA
|
B:LEU37
|
4.5
|
30.6
|
1.0
|
O
|
A:PHE63
|
4.5
|
36.9
|
1.0
|
CAX
|
B:KHS301
|
4.5
|
80.2
|
0.5
|
CG
|
B:LEU37
|
4.5
|
38.1
|
1.0
|
CG
|
A:PHE63
|
4.6
|
34.5
|
1.0
|
C
|
B:ARG36
|
4.6
|
37.7
|
1.0
|
N
|
A:PHE63
|
4.7
|
31.4
|
1.0
|
CAU
|
B:KHS301
|
4.7
|
73.8
|
0.3
|
CD
|
B:ARG36
|
4.7
|
48.7
|
1.0
|
CE1
|
A:PHE63
|
4.7
|
38.9
|
1.0
|
C
|
A:PHE63
|
4.7
|
35.3
|
1.0
|
N
|
B:LEU37
|
4.7
|
30.4
|
1.0
|
O
|
A:LEU62
|
4.8
|
39.1
|
1.0
|
CAU
|
B:KHS301
|
4.9
|
73.7
|
0.5
|
CB
|
B:GLU40
|
4.9
|
43.8
|
1.0
|
|
Chlorine binding site 4 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 4 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl301
b:91.9
occ:0.30
|
CLB
|
B:KHS301
|
0.0
|
91.9
|
0.3
|
CLB
|
B:KHS301
|
0.2
|
92.3
|
0.5
|
CBB
|
B:KHS301
|
1.7
|
79.2
|
0.3
|
CBB
|
B:KHS301
|
1.8
|
79.3
|
0.5
|
CBA
|
B:KHS301
|
2.7
|
80.2
|
0.3
|
CAZ
|
B:KHS301
|
2.7
|
79.9
|
0.3
|
CBA
|
B:KHS301
|
2.7
|
80.3
|
0.5
|
CAZ
|
B:KHS301
|
2.8
|
80.2
|
0.5
|
SAV
|
B:KHS301
|
3.1
|
94.3
|
0.3
|
NH1
|
B:ARG36
|
3.1
|
59.0
|
1.0
|
SAV
|
B:KHS301
|
3.3
|
93.9
|
0.5
|
CD2
|
B:LEU37
|
3.4
|
45.3
|
1.0
|
CZ
|
B:ARG36
|
3.5
|
59.8
|
1.0
|
CD1
|
A:PHE63
|
3.7
|
38.7
|
1.0
|
NH2
|
B:ARG36
|
3.8
|
64.0
|
1.0
|
CA
|
A:PHE63
|
3.8
|
35.5
|
1.0
|
CAW
|
B:KHS301
|
4.0
|
79.0
|
0.3
|
CAY
|
B:KHS301
|
4.0
|
79.1
|
0.3
|
CG
|
B:ARG36
|
4.0
|
47.4
|
1.0
|
CB
|
A:ALA66
|
4.0
|
53.2
|
1.0
|
CAW
|
B:KHS301
|
4.0
|
79.0
|
0.5
|
CAY
|
B:KHS301
|
4.1
|
79.1
|
0.5
|
NE
|
B:ARG36
|
4.2
|
48.8
|
1.0
|
O
|
B:ARG36
|
4.2
|
35.3
|
1.0
|
CB
|
A:PHE63
|
4.3
|
33.0
|
1.0
|
CG
|
B:GLU40
|
4.3
|
59.2
|
1.0
|
O
|
A:PHE63
|
4.4
|
36.9
|
1.0
|
CG
|
A:PHE63
|
4.4
|
34.5
|
1.0
|
CAX
|
B:KHS301
|
4.5
|
80.2
|
0.3
|
CA
|
B:LEU37
|
4.5
|
30.6
|
1.0
|
CE1
|
A:PHE63
|
4.5
|
38.9
|
1.0
|
CG
|
B:LEU37
|
4.6
|
38.1
|
1.0
|
C
|
B:ARG36
|
4.6
|
37.7
|
1.0
|
CAX
|
B:KHS301
|
4.6
|
80.2
|
0.5
|
CD
|
B:ARG36
|
4.6
|
48.7
|
1.0
|
C
|
A:PHE63
|
4.6
|
35.3
|
1.0
|
N
|
A:PHE63
|
4.6
|
31.4
|
1.0
|
N
|
B:LEU37
|
4.7
|
30.4
|
1.0
|
O
|
A:LEU62
|
4.8
|
39.1
|
1.0
|
CAU
|
B:KHS301
|
4.8
|
73.8
|
0.3
|
CAU
|
B:KHS301
|
5.0
|
73.7
|
0.5
|
|
Chlorine binding site 5 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 5 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl301
b:94.3
occ:0.57
|
CLB
|
C:KHS301
|
0.0
|
94.3
|
0.6
|
CLB
|
C:KHS301
|
0.1
|
94.5
|
0.1
|
CBB
|
C:KHS301
|
1.6
|
80.8
|
0.1
|
CBB
|
C:KHS301
|
1.7
|
80.9
|
0.6
|
CAZ
|
C:KHS301
|
2.5
|
78.9
|
0.1
|
CBA
|
C:KHS301
|
2.6
|
79.6
|
0.1
|
CBA
|
C:KHS301
|
2.7
|
79.5
|
0.6
|
CAZ
|
C:KHS301
|
2.7
|
78.9
|
0.6
|
SAV
|
C:KHS301
|
3.0
|
85.3
|
0.1
|
SAV
|
C:KHS301
|
3.2
|
84.4
|
0.6
|
CD1
|
B:PHE63
|
3.3
|
41.5
|
1.0
|
CA
|
B:PHE63
|
3.4
|
33.2
|
1.0
|
CAY
|
C:KHS301
|
3.8
|
79.6
|
0.1
|
CAW
|
C:KHS301
|
3.9
|
80.5
|
0.1
|
CB
|
B:PHE63
|
3.9
|
33.0
|
1.0
|
CD1
|
C:LEU37
|
4.0
|
38.3
|
1.0
|
O
|
B:PHE63
|
4.0
|
36.9
|
1.0
|
CAW
|
C:KHS301
|
4.0
|
80.5
|
0.6
|
CG
|
B:PHE63
|
4.0
|
34.2
|
1.0
|
CAY
|
C:KHS301
|
4.0
|
79.8
|
0.6
|
CE1
|
B:PHE63
|
4.2
|
39.7
|
1.0
|
CB
|
B:ALA66
|
4.2
|
49.2
|
1.0
|
C
|
B:PHE63
|
4.2
|
34.4
|
1.0
|
N
|
B:PHE63
|
4.3
|
32.9
|
1.0
|
CAX
|
C:KHS301
|
4.4
|
80.5
|
0.1
|
O
|
C:ARG36
|
4.4
|
37.0
|
1.0
|
CAX
|
C:KHS301
|
4.5
|
80.8
|
0.6
|
O
|
B:LEU62
|
4.5
|
32.4
|
1.0
|
CG
|
C:ARG36
|
4.5
|
46.5
|
1.0
|
CG
|
C:LEU37
|
4.6
|
39.1
|
1.0
|
CAU
|
C:KHS301
|
4.7
|
73.3
|
0.1
|
CG
|
C:GLU40
|
4.7
|
62.8
|
1.0
|
C
|
B:LEU62
|
4.7
|
36.9
|
1.0
|
C
|
C:ARG36
|
4.8
|
37.8
|
1.0
|
CA
|
C:LEU37
|
4.9
|
29.3
|
1.0
|
CAU
|
C:KHS301
|
4.9
|
72.8
|
0.6
|
|
Chlorine binding site 6 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 6 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl301
b:94.5
occ:0.13
|
CLB
|
C:KHS301
|
0.0
|
94.5
|
0.1
|
CLB
|
C:KHS301
|
0.1
|
94.3
|
0.6
|
CBB
|
C:KHS301
|
1.7
|
80.8
|
0.1
|
CBB
|
C:KHS301
|
1.8
|
80.9
|
0.6
|
CBA
|
C:KHS301
|
2.7
|
79.6
|
0.1
|
CAZ
|
C:KHS301
|
2.7
|
78.9
|
0.1
|
CBA
|
C:KHS301
|
2.8
|
79.5
|
0.6
|
CAZ
|
C:KHS301
|
2.9
|
78.9
|
0.6
|
SAV
|
C:KHS301
|
3.1
|
85.3
|
0.1
|
CD1
|
B:PHE63
|
3.2
|
41.5
|
1.0
|
SAV
|
C:KHS301
|
3.3
|
84.4
|
0.6
|
CA
|
B:PHE63
|
3.4
|
33.2
|
1.0
|
CB
|
B:PHE63
|
3.8
|
33.0
|
1.0
|
CD1
|
C:LEU37
|
3.9
|
38.3
|
1.0
|
CG
|
B:PHE63
|
3.9
|
34.2
|
1.0
|
CAW
|
C:KHS301
|
4.0
|
80.5
|
0.1
|
CAY
|
C:KHS301
|
4.0
|
79.6
|
0.1
|
O
|
B:PHE63
|
4.0
|
36.9
|
1.0
|
CE1
|
B:PHE63
|
4.1
|
39.7
|
1.0
|
CAW
|
C:KHS301
|
4.1
|
80.5
|
0.6
|
CAY
|
C:KHS301
|
4.1
|
79.8
|
0.6
|
C
|
B:PHE63
|
4.2
|
34.4
|
1.0
|
CB
|
B:ALA66
|
4.3
|
49.2
|
1.0
|
N
|
B:PHE63
|
4.3
|
32.9
|
1.0
|
O
|
C:ARG36
|
4.4
|
37.0
|
1.0
|
CG
|
C:ARG36
|
4.4
|
46.5
|
1.0
|
CAX
|
C:KHS301
|
4.5
|
80.5
|
0.1
|
CG
|
C:LEU37
|
4.6
|
39.1
|
1.0
|
O
|
B:LEU62
|
4.6
|
32.4
|
1.0
|
CAX
|
C:KHS301
|
4.6
|
80.8
|
0.6
|
C
|
C:ARG36
|
4.8
|
37.8
|
1.0
|
C
|
B:LEU62
|
4.8
|
36.9
|
1.0
|
CG
|
C:GLU40
|
4.8
|
62.8
|
1.0
|
CA
|
C:LEU37
|
4.9
|
29.3
|
1.0
|
CAU
|
C:KHS301
|
4.9
|
73.3
|
0.1
|
N
|
C:LEU37
|
5.0
|
33.9
|
1.0
|
|
Chlorine binding site 7 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 7 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl301
b:72.6
occ:0.47
|
CLB
|
D:KHS301
|
0.0
|
72.6
|
0.5
|
CLB
|
D:KHS301
|
0.2
|
72.6
|
0.3
|
CBB
|
D:KHS301
|
1.6
|
76.4
|
0.3
|
CBB
|
D:KHS301
|
1.7
|
76.5
|
0.5
|
CAZ
|
D:KHS301
|
2.6
|
78.2
|
0.3
|
CBA
|
D:KHS301
|
2.7
|
75.0
|
0.3
|
CBA
|
D:KHS301
|
2.7
|
75.1
|
0.5
|
CAZ
|
D:KHS301
|
2.7
|
78.2
|
0.5
|
SAV
|
D:KHS301
|
3.0
|
87.0
|
0.3
|
SAV
|
D:KHS301
|
3.2
|
86.8
|
0.5
|
CA
|
C:PHE63
|
3.4
|
34.5
|
1.0
|
OE1
|
D:GLU40
|
3.4
|
72.5
|
1.0
|
CD1
|
C:PHE63
|
3.5
|
41.4
|
1.0
|
O
|
C:PHE63
|
3.9
|
37.5
|
1.0
|
CAY
|
D:KHS301
|
3.9
|
78.7
|
0.3
|
NH1
|
D:ARG36
|
3.9
|
61.3
|
1.0
|
CB
|
C:PHE63
|
3.9
|
35.4
|
1.0
|
CAW
|
D:KHS301
|
4.0
|
75.5
|
0.3
|
CD2
|
D:LEU37
|
4.0
|
41.8
|
1.0
|
CAW
|
D:KHS301
|
4.0
|
75.6
|
0.5
|
CG
|
D:ARG36
|
4.0
|
47.4
|
1.0
|
CAY
|
D:KHS301
|
4.0
|
78.8
|
0.5
|
OE2
|
D:GLU40
|
4.0
|
67.7
|
1.0
|
CD
|
D:GLU40
|
4.1
|
67.9
|
1.0
|
C
|
C:PHE63
|
4.1
|
38.2
|
1.0
|
CZ
|
D:ARG36
|
4.1
|
64.8
|
1.0
|
CG
|
C:PHE63
|
4.1
|
39.4
|
1.0
|
CB
|
C:ALA66
|
4.1
|
49.1
|
1.0
|
O
|
C:LEU62
|
4.2
|
37.6
|
1.0
|
N
|
C:PHE63
|
4.2
|
33.7
|
1.0
|
CE1
|
C:PHE63
|
4.4
|
37.6
|
1.0
|
CAX
|
D:KHS301
|
4.4
|
76.8
|
0.3
|
NH2
|
D:ARG36
|
4.5
|
65.0
|
1.0
|
CAX
|
D:KHS301
|
4.5
|
76.8
|
0.5
|
NE
|
D:ARG36
|
4.5
|
60.0
|
1.0
|
C
|
C:LEU62
|
4.6
|
37.3
|
1.0
|
CAU
|
D:KHS301
|
4.8
|
75.0
|
0.3
|
CD1
|
D:LEU37
|
4.8
|
43.3
|
1.0
|
CD
|
D:ARG36
|
4.9
|
53.5
|
1.0
|
CAU
|
D:KHS301
|
4.9
|
75.1
|
0.5
|
CG
|
D:LEU37
|
5.0
|
39.3
|
1.0
|
|
Chlorine binding site 8 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 8 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl301
b:72.6
occ:0.29
|
CLB
|
D:KHS301
|
0.0
|
72.6
|
0.3
|
CLB
|
D:KHS301
|
0.2
|
72.6
|
0.5
|
CBB
|
D:KHS301
|
1.7
|
76.4
|
0.3
|
CBB
|
D:KHS301
|
1.8
|
76.5
|
0.5
|
CBA
|
D:KHS301
|
2.7
|
75.0
|
0.3
|
CBA
|
D:KHS301
|
2.7
|
75.1
|
0.5
|
CAZ
|
D:KHS301
|
2.7
|
78.2
|
0.3
|
CAZ
|
D:KHS301
|
2.9
|
78.2
|
0.5
|
SAV
|
D:KHS301
|
3.2
|
87.0
|
0.3
|
CD1
|
C:PHE63
|
3.3
|
41.4
|
1.0
|
SAV
|
D:KHS301
|
3.3
|
86.8
|
0.5
|
CA
|
C:PHE63
|
3.3
|
34.5
|
1.0
|
OE1
|
D:GLU40
|
3.5
|
72.5
|
1.0
|
O
|
C:PHE63
|
3.8
|
37.5
|
1.0
|
CB
|
C:PHE63
|
3.9
|
35.4
|
1.0
|
NH1
|
D:ARG36
|
3.9
|
61.3
|
1.0
|
CG
|
D:ARG36
|
3.9
|
47.4
|
1.0
|
CAW
|
D:KHS301
|
4.0
|
75.5
|
0.3
|
CAY
|
D:KHS301
|
4.0
|
78.7
|
0.3
|
CG
|
C:PHE63
|
4.0
|
39.4
|
1.0
|
CAW
|
D:KHS301
|
4.0
|
75.6
|
0.5
|
CZ
|
D:ARG36
|
4.0
|
64.8
|
1.0
|
CD2
|
D:LEU37
|
4.0
|
41.8
|
1.0
|
C
|
C:PHE63
|
4.1
|
38.2
|
1.0
|
OE2
|
D:GLU40
|
4.1
|
67.7
|
1.0
|
CAY
|
D:KHS301
|
4.1
|
78.8
|
0.5
|
CD
|
D:GLU40
|
4.1
|
67.9
|
1.0
|
CB
|
C:ALA66
|
4.2
|
49.1
|
1.0
|
CE1
|
C:PHE63
|
4.2
|
37.6
|
1.0
|
N
|
C:PHE63
|
4.2
|
33.7
|
1.0
|
O
|
C:LEU62
|
4.3
|
37.6
|
1.0
|
NH2
|
D:ARG36
|
4.4
|
65.0
|
1.0
|
NE
|
D:ARG36
|
4.4
|
60.0
|
1.0
|
CAX
|
D:KHS301
|
4.5
|
76.8
|
0.3
|
CAX
|
D:KHS301
|
4.6
|
76.8
|
0.5
|
C
|
C:LEU62
|
4.6
|
37.3
|
1.0
|
CD
|
D:ARG36
|
4.8
|
53.5
|
1.0
|
CD1
|
D:LEU37
|
4.9
|
43.3
|
1.0
|
CAU
|
D:KHS301
|
4.9
|
75.0
|
0.3
|
|
Chlorine binding site 9 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 9 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl301
b:46.1
occ:0.37
|
CLB
|
E:KHS301
|
0.0
|
46.1
|
0.4
|
CLB
|
E:KHS301
|
0.2
|
46.1
|
0.5
|
CBB
|
E:KHS301
|
1.6
|
53.2
|
0.5
|
CBB
|
E:KHS301
|
1.7
|
53.0
|
0.4
|
CAZ
|
E:KHS301
|
2.5
|
52.8
|
0.5
|
CBA
|
E:KHS301
|
2.7
|
52.4
|
0.5
|
CBA
|
E:KHS301
|
2.7
|
52.5
|
0.4
|
CAZ
|
E:KHS301
|
2.7
|
52.9
|
0.4
|
SAV
|
E:KHS301
|
2.9
|
45.8
|
0.5
|
SAV
|
E:KHS301
|
3.2
|
46.6
|
0.4
|
CD1
|
E:LEU37
|
3.5
|
40.3
|
1.0
|
CA
|
D:PHE63
|
3.7
|
34.4
|
1.0
|
CD1
|
D:PHE63
|
3.8
|
37.0
|
1.0
|
CAY
|
E:KHS301
|
3.8
|
53.8
|
0.5
|
CAW
|
E:KHS301
|
3.9
|
51.3
|
0.5
|
CAW
|
E:KHS301
|
4.0
|
51.4
|
0.4
|
CAY
|
E:KHS301
|
4.0
|
53.6
|
0.4
|
CG
|
E:ARG36
|
4.1
|
45.0
|
1.0
|
CB
|
D:PHE63
|
4.1
|
31.3
|
1.0
|
CG
|
E:LEU37
|
4.2
|
34.8
|
1.0
|
CB
|
D:ALA66
|
4.3
|
43.1
|
1.0
|
CAX
|
E:KHS301
|
4.4
|
50.3
|
0.5
|
N
|
D:PHE63
|
4.4
|
25.4
|
1.0
|
CG
|
D:PHE63
|
4.4
|
34.8
|
1.0
|
CAX
|
E:KHS301
|
4.5
|
50.5
|
0.4
|
NH1
|
E:ARG36
|
4.5
|
58.7
|
1.0
|
CG
|
E:GLU40
|
4.6
|
55.1
|
1.0
|
CZ
|
E:ARG36
|
4.6
|
62.0
|
1.0
|
O
|
D:PHE63
|
4.7
|
36.6
|
1.0
|
O
|
D:LEU62
|
4.7
|
38.2
|
1.0
|
CAU
|
E:KHS301
|
4.7
|
50.6
|
0.5
|
C
|
D:PHE63
|
4.7
|
37.9
|
1.0
|
CE1
|
D:PHE63
|
4.8
|
39.5
|
1.0
|
O
|
E:ARG36
|
4.8
|
31.4
|
1.0
|
C
|
D:LEU62
|
4.8
|
38.1
|
1.0
|
CA
|
E:LEU37
|
4.8
|
24.9
|
1.0
|
NE
|
E:ARG36
|
4.9
|
57.2
|
1.0
|
C
|
E:ARG36
|
4.9
|
36.6
|
1.0
|
CAU
|
E:KHS301
|
4.9
|
50.8
|
0.4
|
N
|
E:LEU37
|
4.9
|
26.9
|
1.0
|
|
Chlorine binding site 10 out
of 28 in 6nb1
Go back to
Chlorine Binding Sites List in 6nb1
Chlorine binding site 10 out
of 28 in the Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Crystal Structure of Escherichia Coli Clpp Protease Complexed with Small Molecule Activator, ACP1-06 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl301
b:46.1
occ:0.52
|
CLB
|
E:KHS301
|
0.0
|
46.1
|
0.5
|
CLB
|
E:KHS301
|
0.2
|
46.1
|
0.4
|
CBB
|
E:KHS301
|
1.7
|
53.2
|
0.5
|
CBB
|
E:KHS301
|
1.9
|
53.0
|
0.4
|
CBA
|
E:KHS301
|
2.7
|
52.4
|
0.5
|
CAZ
|
E:KHS301
|
2.7
|
52.8
|
0.5
|
CBA
|
E:KHS301
|
2.8
|
52.5
|
0.4
|
CAZ
|
E:KHS301
|
2.9
|
52.9
|
0.4
|
SAV
|
E:KHS301
|
3.2
|
45.8
|
0.5
|
SAV
|
E:KHS301
|
3.4
|
46.6
|
0.4
|
CD1
|
E:LEU37
|
3.5
|
40.3
|
1.0
|
CD1
|
D:PHE63
|
3.6
|
37.0
|
1.0
|
CA
|
D:PHE63
|
3.7
|
34.4
|
1.0
|
CG
|
E:ARG36
|
3.9
|
45.0
|
1.0
|
CAW
|
E:KHS301
|
4.0
|
51.3
|
0.5
|
CAY
|
E:KHS301
|
4.0
|
53.8
|
0.5
|
CB
|
D:PHE63
|
4.0
|
31.3
|
1.0
|
CAW
|
E:KHS301
|
4.1
|
51.4
|
0.4
|
CAY
|
E:KHS301
|
4.2
|
53.6
|
0.4
|
CG
|
E:LEU37
|
4.3
|
34.8
|
1.0
|
CG
|
D:PHE63
|
4.3
|
34.8
|
1.0
|
CB
|
D:ALA66
|
4.4
|
43.1
|
1.0
|
N
|
D:PHE63
|
4.4
|
25.4
|
1.0
|
NH1
|
E:ARG36
|
4.4
|
58.7
|
1.0
|
CZ
|
E:ARG36
|
4.5
|
62.0
|
1.0
|
CAX
|
E:KHS301
|
4.5
|
50.3
|
0.5
|
CE1
|
D:PHE63
|
4.5
|
39.5
|
1.0
|
O
|
D:PHE63
|
4.6
|
36.6
|
1.0
|
CAX
|
E:KHS301
|
4.7
|
50.5
|
0.4
|
CG
|
E:GLU40
|
4.7
|
55.1
|
1.0
|
C
|
D:PHE63
|
4.7
|
37.9
|
1.0
|
NE
|
E:ARG36
|
4.7
|
57.2
|
1.0
|
O
|
E:ARG36
|
4.7
|
31.4
|
1.0
|
O
|
D:LEU62
|
4.8
|
38.2
|
1.0
|
CA
|
E:LEU37
|
4.8
|
24.9
|
1.0
|
C
|
E:ARG36
|
4.8
|
36.6
|
1.0
|
N
|
E:LEU37
|
4.9
|
26.9
|
1.0
|
C
|
D:LEU62
|
4.9
|
38.1
|
1.0
|
CB
|
E:ARG36
|
4.9
|
38.3
|
1.0
|
CD
|
E:ARG36
|
4.9
|
48.6
|
1.0
|
NH2
|
E:ARG36
|
4.9
|
64.3
|
1.0
|
CAU
|
E:KHS301
|
4.9
|
50.6
|
0.5
|
|
Reference:
M.F.Mabanglo,
W.A.Houry.
Molecular Basis of Clpp Activation By Small Molecules To Be Published.
Page generated: Sun Jul 28 20:28:14 2024
|