Chlorine in PDB 6nkj: 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid.

Enzymatic activity of 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid.

All present enzymatic activity of 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid.:
2.5.1.7;

Protein crystallography data

The structure of 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid., PDB code: 6nkj was solved by G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.77 / 1.30
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 120.713, 120.713, 70.614, 90.00, 90.00, 120.00
R / Rfree (%) 14.5 / 15.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid. (pdb code 6nkj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid., PDB code: 6nkj:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6nkj

Go back to Chlorine Binding Sites List in 6nkj
Chlorine binding site 1 out of 2 in the 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:27.9
occ:1.00
 OG A:SER115 2.8 14.5 1.0
NH2 B:ARG344 2.9 14.0 1.0
O B:HOH1087 3.1 16.1 0.5
O A:GLY146 3.1 14.1 1.0
NH1 B:ARG344 3.3 13.9 1.0
CE2 A:TYR147 3.4 15.0 1.0
C A:GLY146 3.4 14.1 1.0
O A:HOH917 3.5 17.6 1.0
CZ B:ARG344 3.5 13.6 1.0
CD2 A:TYR147 3.6 14.7 1.0
CA A:GLY146 3.6 14.3 1.0
CD1 A:TYR89 3.7 16.2 1.0
CZ A:TYR147 3.7 15.2 1.0
CB A:TYR89 3.8 15.8 1.0
CB A:SER115 3.8 13.7 1.0
O A:ALA145 4.0 16.8 1.0
CG A:TYR89 4.1 15.8 1.0
CG A:TYR147 4.2 14.1 1.0
N A:TYR147 4.2 13.8 1.0
OH A:TYR147 4.2 17.6 1.0
CE1 A:TYR147 4.2 15.0 1.0
CA A:SER115 4.3 13.8 1.0
CD1 A:TYR147 4.4 14.6 1.0
CA A:TYR89 4.6 15.7 1.0
CE1 A:TYR89 4.7 17.1 1.0
N A:GLY146 4.7 14.8 1.0
CA A:TYR147 4.7 13.8 1.0
O A:HOH649 4.8 31.9 1.0
NE B:ARG344 4.8 13.9 1.0
C A:ALA145 4.8 15.7 1.0
N A:MET116 4.8 13.8 1.0
O A:HOH709 4.8 16.3 1.0
N A:TYR89 5.0 14.7 1.0

Chlorine binding site 2 out of 2 in 6nkj

Go back to Chlorine Binding Sites List in 6nkj
Chlorine binding site 2 out of 2 in the 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl504

b:22.6
occ:1.00
 ND2 B:ASN203 3.2 13.3 1.0
O B:HOH1074 3.3 21.3 1.0
O B:HOH972 3.4 25.9 0.7
CG1 B:ILE200 3.9 13.2 1.0
CA B:ILE200 3.9 11.9 1.0
O B:HOH972 4.0 18.3 0.3
CG B:ASN203 4.1 13.1 1.0
CB B:ASN203 4.1 12.1 1.0
N B:ILE200 4.3 11.7 1.0
O B:ALA199 4.3 11.6 1.0
CB B:ILE200 4.4 12.6 1.0
C B:ALA199 4.5 11.4 1.0
O B:HOH998 4.6 16.4 1.0
O B:HOH1246 4.6 32.8 1.0
C B:ILE200 5.0 12.0 1.0
O B:ILE200 5.0 11.9 1.0

Reference:

G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.3 Angstrom Resolution Crystal Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Streptococcus Pneumoniae in Complex with (2R)-2-(Phosphonooxy)Propanoic Acid. To Be Published.
Page generated: Sat Dec 12 13:24:12 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy