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Chlorine in PDB 6nv6: Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound

Enzymatic activity of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound

All present enzymatic activity of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound:
2.5.1.18;

Protein crystallography data

The structure of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound, PDB code: 6nv6 was solved by E.Hilario, S.De Keyser, L.Fan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 89.120, 106.510, 125.230, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 22.6

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 52;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound (pdb code 6nv6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 52 binding sites of Chlorine where determined in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound, PDB code: 6nv6:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 52 in 6nv6

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Chlorine binding site 1 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:41.1
occ:0.69
CL A:CL301 0.0 41.1 0.7
CL A:CL301 2.2 39.0 0.3
O A:SER154 3.3 34.5 1.0
O A:ARG157 3.4 33.8 1.0
N A:ARG157 3.5 35.3 1.0
N A:GLY156 3.8 30.7 1.0
CA A:ARG157 4.1 38.5 1.0
CB A:ARG157 4.1 37.7 1.0
C A:SER154 4.1 39.5 1.0
C A:ARG157 4.1 41.4 1.0
O A:HOH435 4.2 41.2 1.0
C A:GLY155 4.3 39.5 1.0
CA A:GLY155 4.4 35.5 1.0
C A:GLY156 4.5 34.8 1.0
CA A:GLY156 4.5 35.2 1.0
N A:GLY155 4.6 31.1 1.0
O A:HOH406 4.7 35.0 1.0
CB A:SER154 4.7 26.0 1.0
O A:HOH411 5.0 36.5 1.0

Chlorine binding site 2 out of 52 in 6nv6

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Chlorine binding site 2 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:39.0
occ:0.31
CL A:CL301 0.0 39.0 0.3
CL A:CL301 2.2 41.1 0.7
O A:HOH435 3.2 41.2 1.0
CB A:GLU90 3.7 59.1 1.0
O A:SER154 3.7 34.5 1.0
CG A:GLU90 3.8 71.3 1.0
OE1 A:GLU90 4.0 88.2 1.0
CD A:GLU90 4.1 92.1 1.0
CD1 A:LEU93 4.5 46.6 1.0
N A:GLY156 4.5 30.7 1.0
O A:HOH406 4.6 35.0 1.0
O A:GLU90 4.6 47.4 1.0
CA A:GLU90 4.6 51.4 1.0
C A:SER154 4.8 39.5 1.0
CA A:GLY155 4.8 35.5 1.0
C A:GLU90 4.8 46.9 1.0

Chlorine binding site 3 out of 52 in 6nv6

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Chlorine binding site 3 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:60.4
occ:1.00
OH A:TYR74 3.6 43.9 1.0
O A:ASP60 3.7 52.7 1.0
OD2 A:ASP60 4.0 44.6 1.0
CG A:ASP60 4.2 48.6 1.0
OD1 A:ASP60 4.3 50.9 1.0
C A:ASP60 4.6 58.5 1.0
CB B:ALA89 4.7 34.9 1.0
CZ A:TYR74 4.9 41.4 1.0
CB A:ASP60 4.9 45.9 1.0
OH A:TYR79 4.9 40.9 1.0

Chlorine binding site 4 out of 52 in 6nv6

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Chlorine binding site 4 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:70.6
occ:1.00
O A:THR119 3.2 74.3 1.0
C A:THR119 3.4 78.2 1.0
N A:PRO120 3.7 89.9 1.0
C A:ARG118 3.8 66.0 1.0
N A:THR119 3.9 63.1 1.0
O A:ARG118 3.9 69.5 1.0
CA A:PRO120 3.9 88.5 1.0
CA A:THR119 4.1 73.9 1.0
O A:VAL117 4.2 62.2 1.0
CA A:ARG118 4.3 66.6 1.0
CD A:PRO120 4.4 89.5 1.0
N A:ARG118 4.5 60.6 1.0
CG A:PRO120 4.5 84.3 1.0
NH2 A:ARG124 4.6 64.5 1.0
C A:VAL117 4.6 61.4 1.0
CB A:PRO120 4.7 82.7 1.0

Chlorine binding site 5 out of 52 in 6nv6

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Chlorine binding site 5 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:71.2
occ:1.00
C A:GLN150 3.7 40.9 1.0
N A:PRO151 3.8 43.0 1.0
CA A:GLN150 4.0 47.5 1.0
N A:GLN150 4.1 50.6 1.0
O A:GLN150 4.1 41.7 1.0
C A:GLN149 4.1 44.8 1.0
O A:ALA148 4.1 51.3 1.0
O A:GLN149 4.2 47.7 1.0
CA A:PRO151 4.2 38.6 1.0
O A:LEU147 4.3 43.4 1.0
CD A:PRO151 4.3 42.9 1.0
O A:HOH408 4.3 51.3 1.0
C A:ALA148 4.4 43.0 1.0
CB A:PRO151 4.5 32.9 1.0
N A:GLN149 4.8 41.9 1.0
CG A:PRO151 4.8 33.1 1.0
CA A:GLN149 4.9 38.9 1.0

Chlorine binding site 6 out of 52 in 6nv6

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Chlorine binding site 6 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:59.9
occ:1.00
O A:HOH453 3.2 45.8 1.0
OG A:SER13 3.6 44.7 1.0
CG A:PHE113 3.7 35.2 1.0
CD1 A:PHE113 3.7 38.8 1.0
CE2 A:PHE109 3.9 41.4 1.0
CD2 A:PHE113 4.0 41.9 1.0
CE1 A:PHE113 4.1 39.0 1.0
CB A:PHE113 4.2 37.4 1.0
CB A:ALA171 4.3 32.1 1.0
CE2 A:PHE113 4.3 41.4 1.0
O A:HOH401 4.3 41.2 1.0
CZ A:PHE113 4.3 42.5 1.0
CD2 A:PHE109 4.5 35.6 1.0
CB A:SER13 4.5 38.7 1.0
CZ A:PHE109 4.8 31.5 1.0
NH1 A:ARG16 4.9 33.0 1.0
CD1 A:PHE168 5.0 30.9 1.0
N A:SER13 5.0 31.1 1.0

Chlorine binding site 7 out of 52 in 6nv6

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Chlorine binding site 7 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl306

b:66.0
occ:1.00
O A:HOH478 3.7 46.2 1.0
O A:HOH436 4.9 39.2 1.0
O A:HOH428 5.0 16.0 0.5

Chlorine binding site 8 out of 52 in 6nv6

Go back to Chlorine Binding Sites List in 6nv6
Chlorine binding site 8 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl307

b:75.5
occ:1.00
O A:HOH463 4.0 42.0 1.0
O A:THR204 4.4 40.8 1.0
C A:THR204 4.5 40.8 1.0
N A:ALA205 4.6 41.6 1.0
CA A:ALA205 4.7 41.9 1.0
OH A:TYR170 4.8 37.1 1.0
O A:MET203 4.9 45.5 1.0

Chlorine binding site 9 out of 52 in 6nv6

Go back to Chlorine Binding Sites List in 6nv6
Chlorine binding site 9 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl308

b:52.7
occ:1.00
O A:MET175 3.3 45.6 1.0
NH1 A:ARG179 3.7 55.7 1.0
O A:GLU174 3.7 45.5 1.0
O A:PHE173 3.8 49.2 1.0
C A:GLU174 4.0 38.2 1.0
C A:MET175 4.1 50.4 1.0
CA A:GLU174 4.3 42.7 1.0
NH2 A:ARG179 4.4 53.4 1.0
CZ A:ARG179 4.5 55.6 1.0
CA A:PRO176 4.5 43.4 1.0
N A:PRO176 4.7 54.9 1.0
N A:MET175 4.7 39.3 1.0
C A:PHE173 4.8 44.1 1.0
O A:HOH436 4.8 39.2 1.0
OE1 A:GLU174 5.0 44.9 1.0
N A:GLU174 5.0 44.3 1.0

Chlorine binding site 10 out of 52 in 6nv6

Go back to Chlorine Binding Sites List in 6nv6
Chlorine binding site 10 out of 52 in the Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri with Glutathione Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl309

b:61.6
occ:1.00
OH A:TYR29 3.5 48.2 1.0
O A:ARG200 3.8 37.7 1.0
OE2 A:GLU23 4.5 48.8 1.0
CZ A:TYR29 4.6 45.3 1.0
C A:ARG200 4.8 42.3 1.0
CD1 A:LEU19 4.8 31.1 1.0
CD2 A:LEU19 4.8 29.5 1.0
CE2 A:TYR29 4.9 39.9 1.0
CB A:LEU19 4.9 27.4 1.0

Reference:

E.Hilario, S.De Keyser, L.Fan. Crystal Structure of the Theta Class Glutathione S-Transferase From the Citrus Canker Pathogen Xanthomonas Axonopodis Pv. Citri in Complex with Glutathione To Be Published.
Page generated: Mon Jul 29 12:12:11 2024

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