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Chlorine in PDB 6nww: Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group

Protein crystallography data

The structure of Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group, PDB code: 6nww was solved by C.Qiu, T.M.T.Hall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.49 / 2.06
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.692, 63.896, 79.544, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 22.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group (pdb code 6nww). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group, PDB code: 6nww:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6nww

Go back to Chlorine Binding Sites List in 6nww
Chlorine binding site 1 out of 2 in the Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:14.6
occ:1.00
OG B:SER47 3.1 15.2 1.0
N B:ASN25 3.2 11.1 1.0
OG B:SER44 3.2 25.6 1.0
N B:SER44 3.3 11.9 1.0
CB B:SER47 3.5 14.8 1.0
CB B:GLU43 3.6 13.2 1.0
N B:GLU43 3.6 11.0 1.0
O B:ASN25 3.8 13.5 1.0
CB B:ASN25 3.8 17.1 1.0
CB B:SER44 3.9 20.4 1.0
CA B:GLU43 3.9 12.3 1.0
CA B:ASN25 4.0 11.6 1.0
C B:GLU43 4.0 17.8 1.0
CA B:SER44 4.1 16.3 1.0
CA B:GLY24 4.1 12.0 1.0
C B:GLY24 4.2 15.9 1.0
CB B:TYR42 4.3 12.2 1.0
C B:ASN25 4.3 12.3 1.0
CD2 B:TYR42 4.3 8.3 1.0
CG B:ASN25 4.4 17.9 1.0
ND2 B:ASN25 4.4 17.9 1.0
O B:SER44 4.4 12.8 1.0
C B:TYR42 4.5 12.8 1.0
CG B:GLU43 4.5 13.7 1.0
OE2 B:GLU43 4.6 20.1 1.0
CG B:TYR42 4.7 9.3 1.0
CA B:TYR42 4.8 12.4 1.0
C B:SER44 4.8 17.3 1.0
CA B:SER47 4.9 15.4 1.0
CD B:GLU43 5.0 23.1 1.0

Chlorine binding site 2 out of 2 in 6nww

Go back to Chlorine Binding Sites List in 6nww
Chlorine binding site 2 out of 2 in the Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Rrm Domain of S. Pombe PUF1 in the P212121 Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl101

b:22.1
occ:1.00
OG D:SER47 3.0 21.3 1.0
N D:ASN25 3.2 23.6 1.0
OG D:SER44 3.5 37.9 1.0
N D:SER44 3.6 33.0 1.0
N D:GLU43 3.6 28.7 1.0
O D:ASN25 3.7 19.4 1.0
CB D:GLU43 3.7 42.4 1.0
CB D:SER47 3.7 20.1 1.0
CB D:ASN25 3.9 29.1 1.0
CA D:ASN25 3.9 21.3 1.0
CA D:GLY24 4.0 25.5 1.0
CA D:GLU43 4.0 36.0 1.0
CB D:SER44 4.0 35.0 1.0
C D:GLY24 4.0 26.1 1.0
CB D:TYR42 4.1 17.0 1.0
C D:GLU43 4.1 36.3 1.0
C D:ASN25 4.2 20.7 1.0
CD2 D:TYR42 4.2 18.8 1.0
CA D:SER44 4.4 33.0 1.0
CG D:GLU43 4.6 46.9 1.0
C D:TYR42 4.6 24.2 1.0
CG D:TYR42 4.6 15.4 1.0
O D:SER44 4.8 32.8 1.0
CA D:TYR42 4.8 19.9 1.0

Reference:

C.Qiu, R.C.Dutcher, D.F.Porter, Y.Arava, M.Wickens, T.M.T.Hall. Cooperative Activity of Distinct Rna-Binding Modules Define Recognition Specificity of A Fungal PUF1 Protein To Be Published.
Page generated: Mon Jul 29 12:18:11 2024

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