Atomistry » Chlorine » PDB 6o10-6o93 » 6o55
Atomistry »
  Chlorine »
    PDB 6o10-6o93 »
      6o55 »

Chlorine in PDB 6o55: Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila

Enzymatic activity of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila

All present enzymatic activity of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila:
5.4.99.18;

Protein crystallography data

The structure of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila, PDB code: 6o55 was solved by Seattle Structural Genomics Center For Infectious Disease, Seattlestructural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.34 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 137.280, 88.560, 52.510, 90.00, 111.77, 90.00
R / Rfree (%) 14.8 / 18.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila (pdb code 6o55). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila, PDB code: 6o55:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 6o55

Go back to Chlorine Binding Sites List in 6o55
Chlorine binding site 1 out of 4 in the Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:31.3
occ:1.00
 O A:HOH402 2.4 33.8 1.0
O A:HOH317 2.9 34.5 1.0
N A:LYS46 3.3 21.4 1.0
CA A:THR43 3.3 18.7 1.0
C A:THR43 3.4 19.8 1.0
N A:ASP45 3.5 18.3 1.0
CB A:ASP45 3.6 20.9 1.0
CB A:THR43 3.6 22.4 1.0
O A:THR43 3.8 21.9 1.0
CA A:ASP45 3.9 19.4 1.0
N A:PRO44 3.9 18.4 1.0
CB A:LYS46 4.0 25.1 1.0
C A:ASP45 4.0 24.9 1.0
CG2 B:THR152 4.1 19.6 1.0
CD2 B:LEU156 4.1 29.3 1.0
CA A:LYS46 4.2 23.4 1.0
CD A:PRO44 4.3 21.4 1.0
CG2 A:THR43 4.3 22.5 1.0
CD1 B:LEU156 4.3 26.5 1.0
C A:PRO44 4.4 19.8 1.0
CG A:ASP45 4.4 27.0 1.0
OD2 A:ASP45 4.5 33.5 1.0
CG B:LEU156 4.6 22.6 1.0
NH2 A:ARG49 4.6 26.4 0.4
N A:THR43 4.7 19.3 1.0
O A:ARG42 4.7 18.3 1.0
CA A:PRO44 4.7 17.0 1.0
OG1 A:THR43 4.8 21.2 1.0
NH1 A:ARG49 5.0 21.8 0.4
CG A:PRO44 5.0 18.7 1.0

Chlorine binding site 2 out of 4 in 6o55

Go back to Chlorine Binding Sites List in 6o55
Chlorine binding site 2 out of 4 in the Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:31.7
occ:1.00
 O B:HOH371 2.7 31.4 1.0
O B:HOH334 3.0 29.0 1.0
N B:LYS46 3.2 19.0 1.0
CA B:THR43 3.3 19.7 1.0
C B:THR43 3.4 22.4 1.0
N B:ASP45 3.4 17.3 1.0
CB B:THR43 3.5 19.3 1.0
CB B:ASP45 3.5 20.9 1.0
O B:THR43 3.7 20.2 1.0
CA B:ASP45 3.8 20.1 1.0
CB B:LYS46 3.9 18.6 1.0
N B:PRO44 3.9 18.7 1.0
C B:ASP45 3.9 18.3 1.0
CD2 C:LEU156 4.0 24.5 1.0
CA B:LYS46 4.1 17.4 1.0
CG2 C:THR152 4.3 23.6 1.0
CG2 B:THR43 4.3 21.7 1.0
OD2 B:ASP45 4.3 41.3 1.0
CD1 C:LEU156 4.3 21.7 1.0
CG B:ASP45 4.4 27.6 1.0
C B:PRO44 4.4 14.8 1.0
CD B:PRO44 4.4 21.7 1.0
CG C:LEU156 4.5 19.0 1.0
N B:THR43 4.7 18.8 1.0
O B:ARG42 4.7 20.1 1.0
OG1 B:THR43 4.7 19.6 1.0
NH2 B:ARG49 4.7 55.2 1.0
CA B:PRO44 4.8 16.1 1.0
NH1 B:ARG49 4.9 41.7 1.0

Chlorine binding site 3 out of 4 in 6o55

Go back to Chlorine Binding Sites List in 6o55
Chlorine binding site 3 out of 4 in the Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl202

b:26.9
occ:1.00
 O C:HOH395 2.9 23.0 1.0
O C:HOH401 3.0 35.0 1.0
CA C:THR43 3.2 16.4 1.0
N C:LYS46 3.3 17.2 1.0
C C:THR43 3.3 18.6 1.0
N C:ASP45 3.3 18.9 1.0
CB C:THR43 3.5 17.7 1.0
CB C:ASP45 3.6 17.7 1.0
O C:THR43 3.7 16.8 1.0
N C:PRO44 3.7 17.6 1.0
CA C:ASP45 3.8 15.0 1.0
C C:ASP45 4.0 20.1 1.0
CB C:LYS46 4.1 16.6 1.0
CD C:PRO44 4.1 15.5 1.0
CD2 D:LEU156 4.1 21.8 1.0
CG2 D:THR152 4.2 17.2 1.0
CA C:LYS46 4.2 19.4 1.0
C C:PRO44 4.3 15.2 1.0
CG2 C:THR43 4.3 19.9 1.0
CG C:ASP45 4.4 25.3 1.0
OD2 C:ASP45 4.5 34.9 1.0
CD1 D:LEU156 4.5 21.9 1.0
N C:THR43 4.6 14.6 1.0
CA C:PRO44 4.6 14.4 1.0
O C:ARG42 4.6 18.3 1.0
CG D:LEU156 4.7 21.3 1.0
NH2 C:ARG49 4.7 24.7 1.0
OG1 C:THR43 4.7 16.4 1.0
CG C:PRO44 4.8 16.6 1.0
NH1 C:ARG49 4.9 23.8 1.0

Chlorine binding site 4 out of 4 in 6o55

Go back to Chlorine Binding Sites List in 6o55
Chlorine binding site 4 out of 4 in the Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl203

b:33.7
occ:1.00
 O D:HOH412 2.6 30.8 1.0
O D:HOH445 2.7 40.2 1.0
N D:LYS46 3.1 21.0 1.0
CA D:THR43 3.3 22.9 1.0
C D:THR43 3.4 21.7 1.0
N D:ASP45 3.4 19.6 1.0
CB D:THR43 3.5 23.2 1.0
CB D:ASP45 3.5 23.1 1.0
O D:THR43 3.7 22.1 1.0
CA D:ASP45 3.8 24.8 1.0
CB D:LYS46 3.8 24.8 1.0
N D:PRO44 3.9 21.0 1.0
C D:ASP45 3.9 24.1 1.0
CD2 A:LEU156 4.1 26.3 1.0
CA D:LYS46 4.1 22.5 1.0
CG2 A:THR152 4.2 23.0 1.0
CG2 D:THR43 4.3 23.7 1.0
CD D:PRO44 4.3 22.5 1.0
O D:HOH428 4.3 40.8 1.0
C D:PRO44 4.3 18.8 1.0
CD1 A:LEU156 4.4 28.3 1.0
CG D:ASP45 4.5 34.3 1.0
OD2 D:ASP45 4.6 39.5 1.0
CG A:LEU156 4.6 26.6 1.0
N D:THR43 4.6 21.1 1.0
O D:ARG42 4.7 23.5 1.0
OG1 D:THR43 4.7 23.1 1.0
CA D:PRO44 4.7 17.9 1.0

Reference:

M.J.Bolejack, T.E.Edwards, D.D.Lorimer, P.S.Horanyi. Crystal Structure of N5-Carboxyaminoimidazole Ribonucleotide Mutase (Pure) From Legionella Pneumophila To Be Published.
Page generated: Mon Jul 29 12:29:40 2024

Last articles

Cl in 3TXI
Cl in 3TXJ
Cl in 3TXH
Cl in 3TXF
Cl in 3TXE
Cl in 3TXD
Cl in 3TXB
Cl in 3TW9
Cl in 3TX8
Cl in 3TX3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy