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Chlorine in PDB 6os0: Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II

Protein crystallography data

The structure of Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II, PDB code: 6os0 was solved by L.M.Wingler, D.P.Staus, M.A.Skiba, C.Mcmahon, A.L.W.Kleinhenz, R.J.Lefkowitz, A.C.Kruse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.20 / 2.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 135.530, 37.830, 111.920, 90.00, 94.41, 90.00
R / Rfree (%) 25.9 / 31.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II (pdb code 6os0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II, PDB code: 6os0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6os0

Go back to Chlorine Binding Sites List in 6os0
Chlorine binding site 1 out of 2 in the Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2002

b:73.3
occ:1.00
CA A:HIS132 3.4 75.1 1.0
CG A:LYS135 3.5 67.4 1.0
CB A:HIS132 3.5 85.5 1.0
N A:LYS135 3.6 67.9 1.0
C A:HIS132 3.7 59.5 1.0
CB A:LYS135 3.8 82.2 1.0
CD A:LYS135 3.9 78.0 1.0
N A:MET134 4.0 67.2 1.0
N A:PRO133 4.1 56.9 1.0
CB A:MET134 4.2 62.7 1.0
ND1 A:HIS132 4.3 82.9 1.0
O A:HIS132 4.3 51.1 1.0
CA A:LYS135 4.4 72.8 1.0
CD A:PRO133 4.4 61.8 1.0
CG A:HIS132 4.4 77.7 1.0
CE A:LYS135 4.4 75.4 1.0
CA A:MET134 4.4 54.0 1.0
C A:MET134 4.5 60.5 1.0
O A:VAL131 4.5 70.7 1.0
N A:HIS132 4.7 64.4 1.0
CG A:MET134 4.7 70.7 1.0
C A:PRO133 4.9 61.0 1.0

Chlorine binding site 2 out of 2 in 6os0

Go back to Chlorine Binding Sites List in 6os0
Chlorine binding site 2 out of 2 in the Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Synthetic Nanobody-Stabilized Angiotensin II Type 1 Receptor Bound to Angiotensin II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2003

b:78.5
occ:1.00
N D:TYR109 3.3 64.9 1.0
CB A:LYS1308 3.4 91.6 1.0
N A:LYS1308 3.4 77.2 1.0
N A:PHE1309 3.6 92.0 1.0
OD1 D:ASP108 3.6 73.7 1.0
CA A:GLY1306 3.6 66.1 1.0
N D:ASP110 3.7 74.7 1.0
CA A:LYS1308 3.8 77.3 1.0
C A:GLY1306 3.8 66.0 1.0
CA D:ASP108 4.0 47.1 1.0
N A:LYS1307 4.0 56.8 1.0
CD2 D:TYR109 4.0 56.5 1.0
CA D:TYR109 4.1 60.2 1.0
C D:ASP108 4.1 63.8 1.0
C A:LYS1308 4.1 94.3 1.0
CB D:ASP110 4.2 84.9 1.0
CB D:TYR109 4.2 49.6 1.0
C D:TYR109 4.3 70.3 1.0
CG D:ASP108 4.3 72.6 1.0
O A:GLY1306 4.4 67.2 1.0
CB A:PHE1309 4.4 75.6 1.0
C A:LYS1307 4.5 86.2 1.0
CG D:TYR109 4.6 57.9 1.0
CA A:PHE1309 4.6 74.3 1.0
SD A:MET57 4.6 98.8 1.0
CA D:ASP110 4.6 71.2 1.0
CB D:ASP108 4.8 61.8 1.0
O D:PHE107 4.8 53.0 1.0
CA A:LYS1307 4.9 81.6 1.0
N A:GLY1306 5.0 65.7 1.0
N D:ASP108 5.0 53.3 1.0
CE2 D:TYR109 5.0 52.6 1.0

Reference:

L.M.Wingler, M.A.Skiba, C.Mcmahon, D.P.Staus, A.L.W.Kleinhenz, C.-M.Suomivuori, N.R.Latorraca, R.O.Dror, R.J.Lefkowitz, A.C.Kruse. Angiotensin and Biased Analogs Induce Structurally Distinct Active Conformations Within A Gpcr Science 2020.
ISSN: ESSN 1095-9203
DOI: 10.1126/SCIENCE.AAY9813
Page generated: Mon Jul 29 12:50:05 2024

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