Chlorine in PDB 6p2l: Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Protein crystallography data
The structure of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme, PDB code: 6p2l
was solved by
P.J.Stogios,
T.Skarina,
G.Arnal,
H.Brumer,
A.Savchenko,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.13 /
1.08
|
Space group
|
P 2 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
42.869,
119.096,
127.043,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
11.9 /
14
|
Chlorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
27;
Binding sites:
The binding sites of Chlorine atom in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
(pdb code 6p2l). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 27 binding sites of Chlorine where determined in the
Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme, PDB code: 6p2l:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 1 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1016
b:13.6
occ:0.93
|
HH22
|
A:ARG664
|
2.5
|
15.3
|
1.0
|
H
|
A:LEU717
|
2.5
|
15.3
|
1.0
|
HH12
|
A:ARG664
|
2.9
|
13.7
|
1.0
|
O
|
A:HOH1486
|
3.1
|
29.0
|
1.0
|
NH2
|
A:ARG664
|
3.3
|
12.8
|
1.0
|
HB2
|
A:LEU717
|
3.3
|
16.8
|
1.0
|
N
|
A:LEU717
|
3.4
|
12.7
|
1.0
|
HA
|
A:ASP716
|
3.4
|
12.6
|
1.0
|
O
|
A:SER715
|
3.4
|
11.2
|
1.0
|
HG
|
A:LEU717
|
3.6
|
19.3
|
1.0
|
NH1
|
A:ARG664
|
3.6
|
11.4
|
1.0
|
HH21
|
A:ARG664
|
3.9
|
15.3
|
1.0
|
CZ
|
A:ARG664
|
3.9
|
10.2
|
1.0
|
CB
|
A:LEU717
|
4.0
|
14.0
|
1.0
|
CA
|
A:LEU717
|
4.2
|
13.7
|
1.0
|
CA
|
A:ASP716
|
4.2
|
10.5
|
1.0
|
C
|
A:ASP716
|
4.3
|
12.7
|
1.0
|
CG
|
A:LEU717
|
4.3
|
16.1
|
1.0
|
H
|
A:SER718
|
4.3
|
16.8
|
0.2
|
H
|
A:SER718
|
4.3
|
16.8
|
0.8
|
HH11
|
A:ARG664
|
4.4
|
13.7
|
1.0
|
HD12
|
A:LEU717
|
4.4
|
20.2
|
1.0
|
C
|
A:SER715
|
4.5
|
9.6
|
1.0
|
OD1
|
A:ASP716
|
4.5
|
15.3
|
1.0
|
HE2
|
A:PHE698
|
4.6
|
15.7
|
1.0
|
N
|
A:SER718
|
4.7
|
14.0
|
1.0
|
C
|
A:LEU717
|
4.7
|
13.6
|
1.0
|
O
|
A:HOH1795
|
4.7
|
23.0
|
1.0
|
N
|
A:ASP716
|
4.8
|
9.8
|
1.0
|
HB3
|
A:LEU717
|
4.9
|
16.8
|
1.0
|
CD1
|
A:LEU717
|
4.9
|
16.8
|
1.0
|
|
Chlorine binding site 2 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 2 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1017
b:8.5
occ:0.99
|
H
|
A:SER199
|
2.3
|
8.3
|
0.6
|
H
|
A:SER199
|
2.3
|
8.3
|
0.4
|
HA
|
A:THR198
|
3.0
|
7.9
|
1.0
|
HB2
|
A:ARG228
|
3.0
|
6.8
|
1.0
|
O
|
A:HOH2257
|
3.1
|
6.2
|
0.2
|
O
|
A:HOH1582
|
3.1
|
8.4
|
1.0
|
HB
|
A:THR198
|
3.1
|
7.8
|
1.0
|
N
|
A:SER199
|
3.2
|
7.0
|
1.0
|
HB3
|
A:ARG228
|
3.4
|
6.8
|
1.0
|
HB3
|
A:SER199
|
3.5
|
16.2
|
0.4
|
HB2
|
A:SER199
|
3.5
|
7.9
|
0.6
|
HD2
|
A:ARG228
|
3.5
|
7.5
|
1.0
|
O
|
A:HOH2257
|
3.6
|
16.7
|
0.8
|
HB3
|
A:SER199
|
3.6
|
7.9
|
0.6
|
CA
|
A:THR198
|
3.6
|
6.6
|
1.0
|
CB
|
A:ARG228
|
3.7
|
5.7
|
1.0
|
CB
|
A:THR198
|
3.8
|
6.5
|
1.0
|
O
|
A:HOH1565
|
3.8
|
7.5
|
1.0
|
HG22
|
A:THR198
|
3.8
|
8.4
|
1.0
|
C
|
A:THR198
|
3.9
|
6.7
|
1.0
|
CB
|
A:SER199
|
3.9
|
6.6
|
0.6
|
OG
|
A:SER199
|
3.9
|
8.6
|
0.4
|
HD3
|
A:ARG228
|
4.0
|
7.5
|
1.0
|
CB
|
A:SER199
|
4.0
|
13.5
|
0.4
|
CD
|
A:ARG228
|
4.1
|
6.3
|
1.0
|
CA
|
A:SER199
|
4.2
|
6.9
|
0.6
|
HG
|
A:SER199
|
4.2
|
10.4
|
0.4
|
CA
|
A:SER199
|
4.2
|
7.9
|
0.4
|
CG2
|
A:THR198
|
4.3
|
7.0
|
1.0
|
HH11
|
A:ARG228
|
4.5
|
10.6
|
1.0
|
CG
|
A:ARG228
|
4.5
|
5.8
|
1.0
|
HA
|
A:ARG228
|
4.5
|
7.0
|
1.0
|
HA
|
A:SER199
|
4.7
|
8.3
|
0.6
|
HA
|
A:SER199
|
4.7
|
9.5
|
0.4
|
H
|
A:ASN200
|
4.7
|
7.8
|
1.0
|
CA
|
A:ARG228
|
4.8
|
5.8
|
1.0
|
HG21
|
A:THR198
|
4.8
|
8.4
|
1.0
|
O
|
A:THR197
|
4.9
|
7.0
|
1.0
|
HG3
|
A:ARG228
|
4.9
|
7.0
|
1.0
|
HB2
|
A:SER199
|
4.9
|
16.2
|
0.4
|
N
|
A:THR198
|
5.0
|
6.8
|
1.0
|
|
Chlorine binding site 3 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 3 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1018
b:11.2
occ:0.81
|
H
|
A:ILE638
|
2.4
|
9.0
|
1.0
|
HG3
|
A:MET692
|
2.9
|
12.3
|
0.5
|
HD2
|
A:ARG596
|
3.0
|
14.4
|
1.0
|
O
|
A:HOH1298
|
3.2
|
12.8
|
1.0
|
N
|
A:ILE638
|
3.2
|
7.5
|
1.0
|
HB
|
A:ILE638
|
3.3
|
11.8
|
1.0
|
HA2
|
A:GLY637
|
3.3
|
8.8
|
1.0
|
O
|
A:HOH1349
|
3.3
|
18.3
|
1.0
|
HG12
|
A:ILE638
|
3.5
|
13.0
|
1.0
|
HH11
|
A:ARG596
|
3.6
|
40.9
|
1.0
|
NE
|
A:ARG596
|
3.6
|
15.0
|
1.0
|
CZ
|
A:ARG596
|
3.6
|
32.2
|
1.0
|
NH1
|
A:ARG596
|
3.6
|
34.0
|
1.0
|
CD
|
A:ARG596
|
3.7
|
12.0
|
1.0
|
HB2
|
A:MET692
|
3.8
|
22.4
|
0.5
|
HA
|
A:MET692
|
3.8
|
6.8
|
0.5
|
O
|
A:ILE638
|
3.8
|
8.6
|
1.0
|
CG
|
A:MET692
|
3.9
|
10.2
|
0.5
|
HA
|
A:MET692
|
3.9
|
13.9
|
0.5
|
HG3
|
A:ARG596
|
3.9
|
11.2
|
1.0
|
CA
|
A:GLY637
|
3.9
|
7.3
|
1.0
|
CB
|
A:ILE638
|
3.9
|
9.8
|
1.0
|
HA3
|
A:GLY637
|
4.0
|
8.8
|
1.0
|
HE
|
A:ARG596
|
4.0
|
18.0
|
1.0
|
HH12
|
A:ARG596
|
4.0
|
40.9
|
1.0
|
HB3
|
A:ARG596
|
4.0
|
9.8
|
1.0
|
CA
|
A:ILE638
|
4.1
|
7.8
|
1.0
|
H
|
A:GLY693
|
4.1
|
10.3
|
1.0
|
HE2
|
A:MET695
|
4.1
|
33.7
|
1.0
|
C
|
A:GLY637
|
4.1
|
6.9
|
1.0
|
CG1
|
A:ILE638
|
4.1
|
10.8
|
1.0
|
HB3
|
A:MET692
|
4.2
|
22.4
|
0.5
|
HG2
|
A:MET692
|
4.2
|
12.3
|
0.5
|
CG
|
A:ARG596
|
4.3
|
9.4
|
1.0
|
NH2
|
A:ARG596
|
4.3
|
29.7
|
1.0
|
CB
|
A:MET692
|
4.3
|
18.6
|
0.5
|
HH
|
A:TYR554
|
4.4
|
17.7
|
1.0
|
C
|
A:ILE638
|
4.4
|
8.3
|
1.0
|
HG13
|
A:ILE638
|
4.4
|
13.0
|
1.0
|
HD3
|
A:ARG596
|
4.5
|
14.4
|
1.0
|
HE3
|
A:MET692
|
4.5
|
7.6
|
0.5
|
CA
|
A:MET692
|
4.6
|
11.6
|
0.5
|
CA
|
A:MET692
|
4.6
|
5.6
|
0.5
|
HH21
|
A:ARG596
|
4.6
|
35.7
|
1.0
|
HH22
|
A:ARG596
|
4.6
|
35.7
|
1.0
|
O
|
A:HOH2037
|
4.6
|
53.1
|
1.0
|
CB
|
A:MET692
|
4.7
|
5.7
|
0.5
|
O
|
A:HOH1720
|
4.7
|
16.8
|
1.0
|
CB
|
A:ARG596
|
4.7
|
8.2
|
1.0
|
HB2
|
A:MET692
|
4.7
|
6.8
|
0.5
|
SD
|
A:MET692
|
4.8
|
17.8
|
0.5
|
HE1
|
A:MET695
|
4.8
|
33.7
|
1.0
|
N
|
A:GLY693
|
4.8
|
8.6
|
1.0
|
CE
|
A:MET695
|
4.8
|
28.1
|
1.0
|
OH
|
A:TYR554
|
4.9
|
14.7
|
1.0
|
HA
|
A:ILE638
|
4.9
|
9.4
|
1.0
|
O
|
A:VAL691
|
5.0
|
8.2
|
1.0
|
HE3
|
A:MET695
|
5.0
|
33.7
|
1.0
|
|
Chlorine binding site 4 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 4 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1019
b:10.6
occ:0.88
|
H
|
A:LYS55
|
2.4
|
11.7
|
1.0
|
HG2
|
A:LYS55
|
3.0
|
13.9
|
1.0
|
HA
|
A:PRO103
|
3.1
|
11.0
|
1.0
|
O
|
A:HOH1999
|
3.2
|
61.2
|
1.0
|
O
|
A:HOH1343
|
3.2
|
10.5
|
1.0
|
O
|
A:HOH1193
|
3.3
|
20.7
|
1.0
|
O
|
A:HOH2518
|
3.3
|
16.2
|
1.0
|
HA
|
A:HIS54
|
3.3
|
9.2
|
1.0
|
N
|
A:LYS55
|
3.3
|
9.8
|
1.0
|
O
|
A:HOH2488
|
3.3
|
24.3
|
0.4
|
HB2
|
A:LYS55
|
3.3
|
13.0
|
1.0
|
HG3
|
A:PRO103
|
3.3
|
13.5
|
1.0
|
HB3
|
A:PRO103
|
3.7
|
12.4
|
1.0
|
CG
|
A:LYS55
|
3.8
|
11.6
|
1.0
|
CB
|
A:LYS55
|
3.9
|
10.9
|
1.0
|
CA
|
A:PRO103
|
3.9
|
9.1
|
1.0
|
CA
|
A:HIS54
|
4.1
|
7.6
|
1.0
|
CG
|
A:PRO103
|
4.1
|
11.3
|
1.0
|
CB
|
A:PRO103
|
4.1
|
10.4
|
1.0
|
CA
|
A:LYS55
|
4.1
|
11.1
|
1.0
|
C
|
A:HIS54
|
4.1
|
8.5
|
1.0
|
CD2
|
A:HIS54
|
4.2
|
8.2
|
1.0
|
NE2
|
A:HIS54
|
4.2
|
8.4
|
1.0
|
CE1
|
A:HIS54
|
4.2
|
10.5
|
1.0
|
CG
|
A:HIS54
|
4.2
|
7.2
|
1.0
|
HB2
|
A:LEU101
|
4.2
|
8.7
|
1.0
|
ND1
|
A:HIS54
|
4.2
|
9.8
|
1.0
|
H
|
A:THR56
|
4.2
|
13.4
|
1.0
|
HG3
|
A:LYS55
|
4.3
|
13.9
|
1.0
|
N
|
A:PRO103
|
4.4
|
7.9
|
1.0
|
HD2
|
A:HIS54
|
4.5
|
9.8
|
1.0
|
HE2
|
A:HIS54
|
4.5
|
10.0
|
1.0
|
O
|
A:SER53
|
4.5
|
8.5
|
1.0
|
HE1
|
A:HIS54
|
4.6
|
12.6
|
1.0
|
O
|
A:HOH2478
|
4.7
|
18.5
|
1.0
|
CD
|
A:PRO103
|
4.7
|
8.2
|
1.0
|
HD3
|
A:PRO103
|
4.8
|
9.9
|
1.0
|
CB
|
A:HIS54
|
4.8
|
7.6
|
1.0
|
O
|
A:HOH2488
|
4.8
|
29.5
|
0.6
|
HB3
|
A:LYS55
|
4.8
|
13.0
|
1.0
|
HG1
|
A:THR56
|
4.8
|
21.2
|
1.0
|
N
|
A:THR56
|
4.8
|
11.1
|
1.0
|
HD12
|
A:LEU101
|
4.8
|
10.5
|
1.0
|
HG2
|
A:PRO103
|
4.9
|
13.5
|
1.0
|
HE2
|
A:LYS55
|
4.9
|
13.0
|
1.0
|
C
|
A:LYS55
|
4.9
|
13.2
|
1.0
|
HA
|
A:LYS55
|
4.9
|
13.3
|
1.0
|
HD3
|
A:LYS55
|
4.9
|
12.8
|
1.0
|
CD
|
A:LYS55
|
5.0
|
10.7
|
1.0
|
HB3
|
A:LEU101
|
5.0
|
8.7
|
1.0
|
C
|
A:ASP102
|
5.0
|
7.3
|
1.0
|
O
|
A:HOH1727
|
5.0
|
8.3
|
1.0
|
|
Chlorine binding site 5 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 5 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1020
b:11.2
occ:0.94
|
HE1
|
A:TRP192
|
2.4
|
10.2
|
1.0
|
H
|
A:PHE244
|
2.5
|
8.9
|
1.0
|
HA
|
A:THR243
|
2.9
|
9.5
|
1.0
|
HB
|
A:THR243
|
3.2
|
11.5
|
1.0
|
NE1
|
A:TRP192
|
3.2
|
8.5
|
1.0
|
N
|
A:PHE244
|
3.3
|
7.4
|
1.0
|
O
|
A:HOH1986
|
3.3
|
35.2
|
1.0
|
O
|
A:HOH1553
|
3.4
|
30.9
|
1.0
|
CA
|
A:THR243
|
3.6
|
7.9
|
1.0
|
O
|
A:HOH1596
|
3.6
|
36.4
|
1.0
|
HG22
|
A:THR243
|
3.6
|
13.9
|
1.0
|
O
|
A:PHE244
|
3.7
|
9.7
|
1.0
|
CB
|
A:THR243
|
3.8
|
9.6
|
1.0
|
HD1
|
A:TRP192
|
3.9
|
10.3
|
1.0
|
CD1
|
A:TRP192
|
4.0
|
8.6
|
1.0
|
C
|
A:THR243
|
4.0
|
7.7
|
1.0
|
O
|
A:HOH2286
|
4.0
|
53.6
|
1.0
|
HB2
|
A:PHE244
|
4.0
|
8.5
|
1.0
|
CG2
|
A:THR243
|
4.2
|
11.6
|
1.0
|
CE2
|
A:TRP192
|
4.3
|
8.4
|
1.0
|
HZ2
|
A:TRP192
|
4.3
|
11.2
|
1.0
|
CA
|
A:PHE244
|
4.3
|
7.4
|
1.0
|
O
|
A:HOH2067
|
4.3
|
42.2
|
1.0
|
O
|
A:HOH2223
|
4.4
|
42.1
|
1.0
|
C
|
A:PHE244
|
4.4
|
8.3
|
1.0
|
O
|
A:SER242
|
4.6
|
10.2
|
1.0
|
HD1
|
A:PHE244
|
4.6
|
8.1
|
1.0
|
CB
|
A:PHE244
|
4.7
|
7.0
|
1.0
|
HG21
|
A:THR243
|
4.7
|
13.9
|
1.0
|
O
|
A:HOH2514
|
4.7
|
51.7
|
1.0
|
CZ2
|
A:TRP192
|
4.7
|
9.3
|
1.0
|
N
|
A:THR243
|
4.8
|
8.6
|
1.0
|
HG23
|
A:THR243
|
4.9
|
13.9
|
1.0
|
|
Chlorine binding site 6 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 6 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1021
b:19.8
occ:0.81
|
HH12
|
A:ARG700
|
2.3
|
14.0
|
1.0
|
H
|
A:VAL449
|
2.4
|
11.7
|
1.0
|
HA
|
A:ASN448
|
2.7
|
13.2
|
1.0
|
O
|
A:HOH1965
|
2.8
|
39.4
|
1.0
|
HG13
|
A:VAL449
|
3.0
|
13.2
|
1.0
|
HH22
|
A:ARG700
|
3.0
|
14.4
|
1.0
|
NH1
|
A:ARG700
|
3.1
|
11.6
|
1.0
|
HG22
|
A:VAL449
|
3.2
|
11.2
|
1.0
|
O
|
A:HOH1654
|
3.2
|
23.6
|
1.0
|
N
|
A:VAL449
|
3.2
|
9.7
|
1.0
|
CA
|
A:ASN448
|
3.5
|
11.0
|
1.0
|
O
|
A:HOH2369
|
3.6
|
26.9
|
0.6
|
NH2
|
A:ARG700
|
3.6
|
12.0
|
1.0
|
O
|
A:SER447
|
3.7
|
14.4
|
1.0
|
HH11
|
A:ARG700
|
3.7
|
14.0
|
1.0
|
CZ
|
A:ARG700
|
3.8
|
11.0
|
1.0
|
CG1
|
A:VAL449
|
3.9
|
11.0
|
1.0
|
C
|
A:ASN448
|
3.9
|
9.7
|
1.0
|
CG2
|
A:VAL449
|
4.0
|
9.3
|
1.0
|
O
|
A:HOH1644
|
4.1
|
25.1
|
1.0
|
N
|
A:ASN448
|
4.2
|
11.4
|
1.0
|
C
|
A:SER447
|
4.2
|
12.6
|
1.0
|
CB
|
A:VAL449
|
4.2
|
8.3
|
1.0
|
CA
|
A:VAL449
|
4.3
|
8.9
|
1.0
|
HG21
|
A:VAL449
|
4.3
|
11.2
|
1.0
|
HG11
|
A:VAL449
|
4.3
|
13.2
|
1.0
|
OD1
|
A:ASN448
|
4.3
|
12.9
|
1.0
|
O
|
A:HOH1417
|
4.4
|
26.3
|
1.0
|
HH21
|
A:ARG700
|
4.4
|
14.4
|
1.0
|
HG12
|
A:VAL449
|
4.5
|
13.2
|
1.0
|
HG21
|
A:VAL697
|
4.5
|
15.0
|
1.0
|
O
|
A:HOH1562
|
4.7
|
36.0
|
1.0
|
CB
|
A:ASN448
|
4.7
|
11.4
|
1.0
|
HG23
|
A:VAL449
|
4.7
|
11.2
|
1.0
|
H
|
A:TYR450
|
4.8
|
11.2
|
1.0
|
HA
|
A:VAL449
|
4.8
|
10.7
|
1.0
|
HB2
|
A:ASN448
|
4.8
|
13.7
|
1.0
|
H
|
A:ASN448
|
4.9
|
13.7
|
1.0
|
CG
|
A:ASN448
|
4.9
|
12.7
|
1.0
|
O
|
A:HOH1187
|
5.0
|
19.1
|
1.0
|
HG23
|
A:VAL697
|
5.0
|
15.0
|
1.0
|
|
Chlorine binding site 7 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 7 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1022
b:13.5
occ:0.86
|
HE1
|
A:TRP72
|
2.4
|
9.7
|
1.0
|
HH22
|
A:ARG389
|
2.5
|
15.3
|
1.0
|
HH12
|
A:ARG389
|
2.6
|
15.2
|
1.0
|
HZ2
|
A:TRP72
|
3.1
|
10.5
|
1.0
|
O
|
A:HOH1763
|
3.1
|
18.4
|
1.0
|
NE1
|
A:TRP72
|
3.2
|
8.1
|
1.0
|
O
|
A:HOH1947
|
3.3
|
25.8
|
1.0
|
NH2
|
A:ARG389
|
3.3
|
12.7
|
1.0
|
NH1
|
A:ARG389
|
3.3
|
12.6
|
1.0
|
HG
|
A:SER77
|
3.7
|
20.0
|
1.0
|
O
|
A:HOH1321
|
3.7
|
19.9
|
1.0
|
CZ2
|
A:TRP72
|
3.7
|
8.8
|
1.0
|
HB1
|
A:ALA74
|
3.8
|
13.7
|
1.0
|
CZ
|
A:ARG389
|
3.8
|
11.8
|
1.0
|
CE2
|
A:TRP72
|
3.8
|
8.2
|
1.0
|
HA
|
A:ALA74
|
3.9
|
11.7
|
1.0
|
HH21
|
A:ARG389
|
4.0
|
15.3
|
1.0
|
HH22
|
A:ARG391
|
4.0
|
10.7
|
1.0
|
HH21
|
A:ARG391
|
4.0
|
10.7
|
1.0
|
HH11
|
A:ARG389
|
4.0
|
15.2
|
1.0
|
O
|
A:HOH1347
|
4.1
|
9.3
|
1.0
|
HB2
|
A:ALA74
|
4.3
|
13.7
|
1.0
|
NH2
|
A:ARG391
|
4.3
|
8.9
|
1.0
|
CB
|
A:ALA74
|
4.4
|
11.4
|
1.0
|
CD1
|
A:TRP72
|
4.4
|
8.0
|
1.0
|
OG
|
A:SER77
|
4.5
|
16.7
|
1.0
|
CA
|
A:ALA74
|
4.6
|
9.7
|
1.0
|
HD1
|
A:TRP72
|
4.6
|
9.7
|
1.0
|
O
|
A:ALA74
|
4.7
|
11.8
|
1.0
|
HA
|
A:SER77
|
4.7
|
12.9
|
1.0
|
|
Chlorine binding site 8 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 8 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1023
b:13.5
occ:0.80
|
HD22
|
A:ASN586
|
2.6
|
18.6
|
1.0
|
HA2
|
A:GLY588
|
3.0
|
11.9
|
1.0
|
HG3
|
A:GLN589
|
3.0
|
12.9
|
1.0
|
HA3
|
A:GLY568
|
3.2
|
13.1
|
1.0
|
HB3
|
A:ASN586
|
3.3
|
11.5
|
1.0
|
O
|
A:HOH2007
|
3.3
|
33.6
|
1.0
|
ND2
|
A:ASN586
|
3.4
|
15.5
|
1.0
|
HB2
|
A:ASN586
|
3.4
|
11.5
|
1.0
|
O
|
A:HOH1132
|
3.5
|
32.3
|
1.0
|
O
|
A:HOH1760
|
3.7
|
22.3
|
1.0
|
CB
|
A:ASN586
|
3.7
|
9.6
|
1.0
|
H
|
A:GLN589
|
3.8
|
11.2
|
1.0
|
CA
|
A:GLY588
|
3.9
|
9.9
|
1.0
|
O
|
A:SER567
|
4.0
|
15.2
|
1.0
|
CG
|
A:GLN589
|
4.0
|
10.8
|
1.0
|
HD21
|
A:ASN586
|
4.0
|
18.6
|
1.0
|
CG
|
A:ASN586
|
4.1
|
11.1
|
1.0
|
N
|
A:GLN589
|
4.1
|
9.4
|
1.0
|
CA
|
A:GLY568
|
4.1
|
10.9
|
1.0
|
H
|
A:GLY588
|
4.2
|
11.3
|
1.0
|
C
|
A:GLY588
|
4.3
|
8.8
|
1.0
|
HG2
|
A:GLN589
|
4.3
|
12.9
|
1.0
|
N
|
A:GLY588
|
4.4
|
9.4
|
1.0
|
OE1
|
A:GLN589
|
4.5
|
18.1
|
1.0
|
O
|
A:GLY568
|
4.5
|
10.2
|
1.0
|
CD
|
A:GLN589
|
4.5
|
17.8
|
1.0
|
HA3
|
A:GLY588
|
4.5
|
11.9
|
1.0
|
C
|
A:GLY568
|
4.6
|
9.4
|
1.0
|
HA2
|
A:GLY568
|
4.6
|
13.1
|
1.0
|
C
|
A:SER567
|
4.8
|
13.1
|
1.0
|
CB
|
A:GLN589
|
4.9
|
10.7
|
1.0
|
N
|
A:GLY568
|
4.9
|
10.8
|
1.0
|
HB2
|
A:GLN589
|
5.0
|
12.8
|
1.0
|
CA
|
A:GLN589
|
5.0
|
9.6
|
1.0
|
|
Chlorine binding site 9 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 9 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1024
b:17.7
occ:0.92
|
HD22
|
A:ASN472
|
2.3
|
23.4
|
1.0
|
HB
|
A:THR557
|
2.8
|
14.4
|
1.0
|
HB3
|
A:ASP513
|
2.9
|
16.1
|
1.0
|
O
|
A:HOH2387
|
3.1
|
42.0
|
1.0
|
HB2
|
A:ASN472
|
3.1
|
16.2
|
1.0
|
ND2
|
A:ASN472
|
3.2
|
19.5
|
1.0
|
O
|
A:HOH2056
|
3.2
|
40.5
|
1.0
|
HB3
|
A:ALA512
|
3.5
|
12.7
|
1.0
|
O
|
A:HOH1661
|
3.5
|
23.8
|
1.0
|
HA
|
A:ASP513
|
3.6
|
13.9
|
1.0
|
HD21
|
A:ASN472
|
3.7
|
23.4
|
1.0
|
CB
|
A:THR557
|
3.7
|
12.0
|
1.0
|
CB
|
A:ASP513
|
3.7
|
13.4
|
1.0
|
CB
|
A:ASN472
|
3.8
|
13.5
|
1.0
|
HB3
|
A:ASN472
|
3.8
|
16.2
|
1.0
|
N
|
A:ASP513
|
3.8
|
10.7
|
1.0
|
HB1
|
A:ALA512
|
3.8
|
12.7
|
1.0
|
HG21
|
A:THR557
|
3.8
|
14.9
|
1.0
|
CA
|
A:ASP513
|
3.9
|
11.6
|
1.0
|
H
|
A:ASP513
|
3.9
|
12.8
|
1.0
|
CG
|
A:ASN472
|
4.0
|
17.5
|
1.0
|
C
|
A:ALA512
|
4.1
|
10.5
|
1.0
|
CB
|
A:ALA512
|
4.1
|
10.6
|
1.0
|
HB2
|
A:ASP513
|
4.1
|
16.1
|
1.0
|
OG1
|
A:THR557
|
4.2
|
11.4
|
1.0
|
CG2
|
A:THR557
|
4.2
|
12.5
|
1.0
|
O
|
A:ALA512
|
4.4
|
10.8
|
1.0
|
O
|
A:HOH2197
|
4.4
|
50.7
|
1.0
|
H
|
A:THR557
|
4.5
|
12.6
|
1.0
|
HG22
|
A:THR557
|
4.5
|
14.9
|
1.0
|
CA
|
A:ALA512
|
4.7
|
10.1
|
1.0
|
O
|
A:HOH2511
|
4.7
|
58.7
|
1.0
|
CA
|
A:THR557
|
4.8
|
10.3
|
1.0
|
O
|
A:HOH1352
|
4.9
|
24.2
|
1.0
|
CG
|
A:ASP513
|
4.9
|
12.0
|
1.0
|
O
|
A:HOH2407
|
4.9
|
61.4
|
1.0
|
HB2
|
A:ALA512
|
4.9
|
12.7
|
1.0
|
N
|
A:THR557
|
4.9
|
10.5
|
1.0
|
HA
|
A:THR557
|
4.9
|
12.3
|
1.0
|
O
|
A:HOH1168
|
5.0
|
22.6
|
1.0
|
HG1
|
A:THR557
|
5.0
|
13.7
|
1.0
|
|
Chlorine binding site 10 out
of 27 in 6p2l
Go back to
Chlorine Binding Sites List in 6p2l
Chlorine binding site 10 out
of 27 in the Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Crystal Structure of Niastella Koreensis GH74 (NKGH74) Enzyme within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1025
b:32.8
occ:0.75
|
H
|
A:ALA106
|
2.1
|
11.2
|
1.0
|
O
|
A:HOH2136
|
2.5
|
14.5
|
0.5
|
O
|
A:HOH1911
|
2.8
|
61.4
|
1.0
|
HA
|
A:ASN105
|
2.8
|
10.4
|
1.0
|
N
|
A:ALA106
|
3.0
|
9.3
|
1.0
|
HB3
|
A:ALA106
|
3.2
|
13.2
|
1.0
|
O
|
A:HOH2136
|
3.2
|
20.5
|
0.5
|
HB2
|
A:ALA106
|
3.3
|
13.2
|
1.0
|
O
|
A:HOH1338
|
3.4
|
21.6
|
1.0
|
CB
|
A:ALA106
|
3.6
|
11.0
|
1.0
|
CA
|
A:ASN105
|
3.6
|
8.7
|
1.0
|
C
|
A:ASN105
|
3.8
|
8.2
|
1.0
|
CA
|
A:ALA106
|
3.9
|
9.1
|
1.0
|
O
|
A:GLN104
|
3.9
|
10.7
|
1.0
|
O
|
A:HOH1708
|
4.0
|
40.2
|
1.0
|
O
|
A:HOH2462
|
4.1
|
40.6
|
1.0
|
N
|
A:ASN105
|
4.1
|
8.7
|
1.0
|
C
|
A:GLN104
|
4.3
|
9.4
|
1.0
|
O
|
A:HOH1761
|
4.3
|
49.7
|
1.0
|
HB3
|
A:SER57
|
4.4
|
13.1
|
1.0
|
HE1
|
A:HIS54
|
4.4
|
12.6
|
1.0
|
HA
|
A:ALA106
|
4.5
|
10.8
|
1.0
|
OD1
|
A:ASN105
|
4.5
|
11.8
|
1.0
|
HB1
|
A:ALA106
|
4.5
|
13.2
|
1.0
|
H
|
A:ASN107
|
4.6
|
10.0
|
1.0
|
H
|
A:ASN105
|
4.6
|
10.5
|
1.0
|
CE1
|
A:HIS54
|
4.8
|
10.5
|
1.0
|
HE2
|
A:HIS54
|
4.8
|
10.0
|
1.0
|
CB
|
A:ASN105
|
4.8
|
10.3
|
1.0
|
C
|
A:ALA106
|
5.0
|
9.4
|
1.0
|
NE2
|
A:HIS54
|
5.0
|
8.4
|
1.0
|
O
|
A:ASN105
|
5.0
|
8.6
|
1.0
|
|
Reference:
G.Arnal,
P.J.Stogios,
J.Asohan,
M.A.Attia,
T.Skarina,
A.H.Viborg,
B.Henrissat,
A.Savchenko,
H.Brumer.
Substrate Specificity, Regiospecificity, and Processivity in Glycoside Hydrolase Family 74. J.Biol.Chem. V. 294 13233 2019.
ISSN: ESSN 1083-351X
PubMed: 31324716
DOI: 10.1074/JBC.RA119.009861
Page generated: Mon Jul 29 13:04:35 2024
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