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Chlorine in PDB 6p4o: Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution

Protein crystallography data

The structure of Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution, PDB code: 6p4o was solved by L.Fan, K.T.Duprez, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.93 / 3.15
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 217.723, 125.851, 148.970, 90.00, 101.52, 90.00
R / Rfree (%) 26.5 / 28.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution (pdb code 6p4o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution, PDB code: 6p4o:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 6p4o

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Chlorine binding site 1 out of 5 in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:62.0
occ:1.00
OE1 C:GLN189 3.8 49.6 1.0
O C:HOH508 3.9 22.2 1.0
NE2 C:GLN189 4.2 55.3 1.0
OH A:TYR29 4.3 49.1 1.0
CD C:GLN189 4.4 49.6 1.0
CZ3 A:TRP22 4.7 45.9 1.0
CE3 A:TRP22 4.8 45.7 1.0
CH2 A:TRP22 4.8 46.7 1.0
CD2 A:TRP22 4.9 46.1 1.0
CZ2 A:TRP22 4.9 49.0 1.0
CE2 A:TRP22 4.9 48.4 1.0

Chlorine binding site 2 out of 5 in 6p4o

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Chlorine binding site 2 out of 5 in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:81.2
occ:1.00
O A:GLN273 3.2 0.3 1.0
O A:HOH619 4.0 53.4 1.0
C A:GLN273 4.3 0.6 1.0
CA A:GLN273 4.8 0.3 1.0

Chlorine binding site 3 out of 5 in 6p4o

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Chlorine binding site 3 out of 5 in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:89.8
occ:1.00
OE1 A:GLU211 3.0 72.2 1.0
O A:HOH605 3.0 34.4 1.0
CD A:GLU211 3.8 70.4 1.0
OE2 A:GLU211 3.9 68.1 1.0
O A:GLY208 5.0 52.5 1.0

Chlorine binding site 4 out of 5 in 6p4o

Go back to Chlorine Binding Sites List in 6p4o
Chlorine binding site 4 out of 5 in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl501

b:0.2
occ:1.00
NZ F:LYS59 2.5 86.0 1.0
CL F:CL502 3.8 72.7 1.0
O F:ALA7 3.9 54.5 1.0
CE F:LYS59 4.0 79.5 1.0
O F:PHE9 4.3 64.7 1.0
CA F:ARG8 4.5 66.6 1.0
N F:PHE9 4.5 61.6 1.0
CD F:LYS59 4.6 77.7 1.0
C F:ALA7 4.9 55.0 1.0

Chlorine binding site 5 out of 5 in 6p4o

Go back to Chlorine Binding Sites List in 6p4o
Chlorine binding site 5 out of 5 in the Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl502

b:72.7
occ:1.00
NZ F:LYS59 3.7 86.0 1.0
O F:ALA7 3.8 54.5 1.0
CL F:CL501 3.8 0.2 1.0
CE F:LYS59 4.6 79.5 1.0
O F:TRP4 4.7 67.8 1.0
C F:ALA7 4.9 55.0 1.0
O F:GLU5 4.9 66.0 1.0

Reference:

L.Fan, K.T.Duprez. Complex of Xpb Helicase with BAX1 Endonuclease From Sulfurisphaera Tokodaii at 3.15 Angstroms Resolution To Be Published.
Page generated: Sat Jul 12 18:13:26 2025

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