Chlorine in PDB 6p6m: Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir

Enzymatic activity of Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir

All present enzymatic activity of Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir:
3.4.21.98; 3.6.1.15; 3.6.4.13;

Protein crystallography data

The structure of Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir, PDB code: 6p6m was solved by J.Timm, C.A.Schiffer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.83 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.226, 58.550, 60.356, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 25.6

Other elements in 6p6m:

The structure of Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir (pdb code 6p6m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir, PDB code: 6p6m:

Chlorine binding site 1 out of 1 in 6p6m

Go back to Chlorine Binding Sites List in 6p6m
Chlorine binding site 1 out of 1 in the Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hcv NS3/4A Protease Domain of Genotype 1A C159 in Complex with Glecaprevir within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1305

b:27.1
occ:1.00
 HG A:SER1174 2.4 24.5 1.0
HH12 A:ARG1155 2.7 22.9 1.0
O A:HOH1464 3.0 29.8 1.0
HG2 A:LYS1080 3.0 22.9 1.0
HD2 A:PRO1171 3.1 23.8 1.0
HG23 A:ILE1170 3.2 22.4 1.0
OG A:SER1174 3.2 20.4 1.0
HH22 A:ARG1155 3.4 26.4 1.0
HB3 A:LYS1080 3.5 18.9 1.0
HD3 A:LYS1080 3.5 20.2 1.0
NH1 A:ARG1155 3.5 19.1 1.0
HE2 A:LYS1080 3.7 28.1 1.0
CG A:LYS1080 3.7 19.1 1.0
HB2 A:SER1174 3.7 24.7 1.0
HD3 A:PRO1171 3.8 23.8 1.0
HA A:ILE1170 3.8 20.6 1.0
CB A:SER1174 3.9 20.6 1.0
HB3 A:SER1174 3.9 24.7 1.0
CD A:PRO1171 3.9 19.8 1.0
O A:HOH1411 4.0 29.7 1.0
CD A:LYS1080 4.0 16.8 1.0
CB A:LYS1080 4.0 15.7 1.0
HA A:LYS1080 4.0 22.9 1.0
HH11 A:ARG1155 4.0 22.9 1.0
NH2 A:ARG1155 4.1 22.0 1.0
HG12 A:ILE1170 4.2 20.8 1.0
CG2 A:ILE1170 4.2 18.6 1.0
CZ A:ARG1155 4.3 20.6 1.0
CE A:LYS1080 4.3 23.4 1.0
HG3 A:LYS1080 4.5 22.9 1.0
HZ1 A:LYS1080 4.6 25.5 1.0
CA A:LYS1080 4.6 19.1 1.0
HG22 A:ILE1170 4.6 22.4 1.0
HG2 A:PRO1171 4.6 26.8 1.0
CA A:ILE1170 4.7 17.1 1.0
HG21 A:ILE1170 4.7 22.4 1.0
CB A:ILE1170 4.8 20.2 1.0
HH21 A:ARG1155 4.9 26.4 1.0
CG A:PRO1171 4.9 22.3 1.0
HB2 A:LYS1080 4.9 18.9 1.0
HD2 A:LYS1080 4.9 20.2 1.0
CG1 A:ILE1170 4.9 17.3 1.0
N A:PRO1171 4.9 18.1 1.0

Reference:

J.Timm, K.Kosovrasti, M.Henes, F.Leidner, S.Hou, N.Kurt-Yilmaz, C.A.Schiffer. Hcv NS3/4A Protease Domain of Genotype 1A in Complex with Glecaprevir To Be Published.
Page generated: Sat Dec 12 13:29:00 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy