Chlorine in PDB 6p7o: Structure of E. Coli MS115-1 Nucc, Apo Form

Protein crystallography data

The structure of Structure of E. Coli MS115-1 Nucc, Apo Form, PDB code: 6p7o was solved by Q.Ye, R.K.Lau, K.R.Berg, K.D.Corbett, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.91 / 1.75
Space group F 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 208.790, 208.790, 208.790, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 19.6

Other elements in 6p7o:

The structure of Structure of E. Coli MS115-1 Nucc, Apo Form also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of E. Coli MS115-1 Nucc, Apo Form (pdb code 6p7o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of E. Coli MS115-1 Nucc, Apo Form, PDB code: 6p7o:

Chlorine binding site 1 out of 1 in 6p7o

Go back to Chlorine Binding Sites List in 6p7o
Chlorine binding site 1 out of 1 in the Structure of E. Coli MS115-1 Nucc, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of E. Coli MS115-1 Nucc, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:40.9
occ:1.00
H A:ILE149 2.3 36.1 1.0
HH22 A:ARG129 2.5 46.6 1.0
H32 A:PGE303 2.8 84.8 1.0
O A:HOH565 3.0 47.3 1.0
HB A:ILE149 3.1 35.6 1.0
N A:ILE149 3.2 30.1 1.0
NH2 A:ARG129 3.2 38.8 1.0
HA A:PRO148 3.3 41.7 1.0
O A:HOH557 3.3 52.9 1.0
HD3 A:ARG125 3.4 39.1 1.0
HH21 A:ARG129 3.5 46.6 1.0
HE A:ARG125 3.5 38.4 1.0
HG2 A:ARG125 3.6 33.2 1.0
H4 A:PGE303 3.6 67.9 1.0
HG13 A:ILE149 3.7 36.6 1.0
CB A:ILE149 3.8 29.7 1.0
C3 A:PGE303 3.8 70.6 1.0
HH12 A:ARG129 4.0 33.7 1.0
NE A:ARG125 4.0 32.0 1.0
CD A:ARG125 4.0 32.6 1.0
O A:ILE147 4.0 34.0 1.0
CA A:ILE149 4.0 24.9 1.0
CA A:PRO148 4.0 34.8 1.0
C A:PRO148 4.1 30.6 1.0
HD12 A:ILE149 4.1 35.8 1.0
C4 A:PGE303 4.2 56.6 1.0
CZ A:ARG129 4.2 36.7 1.0
CG1 A:ILE149 4.2 30.5 1.0
H3 A:PGE303 4.2 84.8 1.0
O A:ILE149 4.3 32.7 1.0
CG A:ARG125 4.3 27.7 1.0
NH1 A:ARG129 4.4 28.1 1.0
O3 A:PGE303 4.5 72.2 1.0
HB3 A:ARG125 4.6 36.1 1.0
CD1 A:ILE149 4.6 29.8 1.0
C A:ILE149 4.6 31.4 1.0
O A:HOH566 4.8 64.9 1.0
HA A:ILE149 4.8 29.9 1.0
O A:HOH495 4.8 45.1 1.0
O2 A:PGE303 4.9 69.9 1.0
HD2 A:ARG125 4.9 39.1 1.0
HD11 A:ILE149 4.9 35.8 1.0
C A:ILE147 5.0 33.4 1.0
HA A:ARG125 5.0 33.6 1.0
CB A:ARG125 5.0 30.1 1.0

Reference:

R.K.Lau, Q.Ye, E.A.Birkholz, K.R.Berg, L.Patel, I.T.Mathews, J.D.Watrous, K.Ego, A.T.Whiteley, B.Lowey, J.J.Mekalanos, P.J.Kranzusch, M.Jain, J.Pogliano, K.D.Corbett. Structure and Mechanism of A Cyclic Trinucleotide-Activated Bacterial Endonuclease Mediating Bacteriophage Immunity To Be Published.
Page generated: Sat Dec 12 13:29:05 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy