Chlorine in PDB 6pbb: Crystal Structure of Hen Egg White Lysozyme in Complex with I3C

Enzymatic activity of Crystal Structure of Hen Egg White Lysozyme in Complex with I3C

All present enzymatic activity of Crystal Structure of Hen Egg White Lysozyme in Complex with I3C:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Hen Egg White Lysozyme in Complex with I3C, PDB code: 6pbb was solved by J.Q.Truong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.51 / 1.89
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.160, 77.160, 38.201, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24

Other elements in 6pbb:

The structure of Crystal Structure of Hen Egg White Lysozyme in Complex with I3C also contains other interesting chemical elements:

Iodine (I) 12 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hen Egg White Lysozyme in Complex with I3C (pdb code 6pbb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Hen Egg White Lysozyme in Complex with I3C, PDB code: 6pbb:

Chlorine binding site 1 out of 1 in 6pbb

Go back to Chlorine Binding Sites List in 6pbb
Chlorine binding site 1 out of 1 in the Crystal Structure of Hen Egg White Lysozyme in Complex with I3C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hen Egg White Lysozyme in Complex with I3C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:44.8
occ:1.00
N A:GLY26 2.9 23.4 1.0
OG A:SER24 3.0 27.5 1.0
CA A:GLY26 3.3 25.8 1.0
CB A:SER24 3.5 29.7 1.0
CA A:GLN121 3.5 41.5 1.0
CD1 A:ILE124 3.8 39.4 1.0
CB A:GLN121 3.8 49.7 1.0
N A:LEU25 4.0 25.1 1.0
N A:GLN121 4.0 34.4 1.0
C A:LEU25 4.1 25.2 1.0
CG A:GLN121 4.2 56.4 1.0
C A:SER24 4.2 27.1 1.0
CG1 A:ILE124 4.3 36.8 1.0
C A:GLY26 4.4 24.2 1.0
CG2 A:VAL120 4.4 32.3 1.0
C A:VAL120 4.4 31.4 1.0
O A:VAL120 4.5 30.2 1.0
CA A:SER24 4.5 26.2 1.0
CA A:LEU25 4.6 24.6 1.0
N A:ASN27 4.6 23.6 1.0
O A:SER24 4.7 22.7 1.0
C A:GLN121 4.7 39.8 1.0
O A:GLN121 4.9 35.9 1.0
CB A:LEU25 5.0 25.0 1.0

Reference:

J.Q.Truong, S.Panjikar, L.Shearwin-Whyatt, J.B.Bruning, K.E.Shearwin. Combining Random Microseed Matrix Screening and the Magic Triangle For the Efficient Structure Solution of A Potential Lysin From Bacteriophage P68. Acta Crystallogr D Struct V. 75 670 2019BIOL.
ISSN: ISSN 2059-7983
PubMed: 31282476
DOI: 10.1107/S2059798319009008
Page generated: Sat Dec 12 13:29:28 2020

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