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Chlorine in PDB 6ph0: T4 Lysozyme Pseudo-Wild Type Soaked in Tempo

Enzymatic activity of T4 Lysozyme Pseudo-Wild Type Soaked in Tempo

All present enzymatic activity of T4 Lysozyme Pseudo-Wild Type Soaked in Tempo:
3.2.1.17;

Protein crystallography data

The structure of T4 Lysozyme Pseudo-Wild Type Soaked in Tempo, PDB code: 6ph0 was solved by M.J.Cuneo, D.A.Myles, L.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.53 / 1.95
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 59.656, 59.656, 95.004, 90.00, 90.00, 120.00
R / Rfree (%) 16.2 / 19.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the T4 Lysozyme Pseudo-Wild Type Soaked in Tempo (pdb code 6ph0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the T4 Lysozyme Pseudo-Wild Type Soaked in Tempo, PDB code: 6ph0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6ph0

Go back to Chlorine Binding Sites List in 6ph0
Chlorine binding site 1 out of 2 in the T4 Lysozyme Pseudo-Wild Type Soaked in Tempo


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of T4 Lysozyme Pseudo-Wild Type Soaked in Tempo within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:28.1
occ:1.00
O A:HOH491 3.0 26.8 1.0
N A:ARG145 3.1 11.5 1.0
N A:ASN144 3.3 14.2 1.0
C A:THR142 3.4 17.8 1.0
O A:HOH440 3.4 29.5 1.0
CA A:THR142 3.5 15.3 1.0
CB A:THR142 3.6 17.0 1.0
N A:PRO143 3.7 15.4 1.0
CB A:ASN144 3.7 20.5 1.0
O A:THR142 3.8 14.6 1.0
CB A:ARG145 3.8 20.7 1.0
CA A:ASN144 3.8 17.0 1.0
C A:ASN144 3.9 17.4 1.0
CA A:ARG145 4.1 15.6 1.0
CD A:PRO143 4.2 15.1 1.0
C A:PRO143 4.2 18.3 1.0
CG2 A:THR142 4.3 17.1 1.0
CA A:PRO143 4.5 13.9 1.0
O A:HOH439 4.8 25.9 1.0
O A:HOH363 4.8 21.1 1.0
OG1 A:THR142 4.8 13.6 1.0
CG A:ASN144 4.8 21.8 1.0
N A:THR142 4.9 13.4 1.0
CG A:PRO143 4.9 17.9 1.0

Chlorine binding site 2 out of 2 in 6ph0

Go back to Chlorine Binding Sites List in 6ph0
Chlorine binding site 2 out of 2 in the T4 Lysozyme Pseudo-Wild Type Soaked in Tempo


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of T4 Lysozyme Pseudo-Wild Type Soaked in Tempo within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:30.7
occ:1.00
O A:HOH406 2.9 18.0 1.0
O A:HOH369 3.2 21.4 1.0
O A:HOH310 3.4 26.0 1.0
O A:HOH479 3.6 33.8 1.0
CE1 A:HIS31 3.7 19.7 1.0
CB A:ALA49 4.0 18.8 1.0
NE2 A:HIS31 4.0 18.0 1.0
OE1 A:GLN69 4.4 20.8 1.0
CA A:ALA49 4.4 20.9 1.0
O A:HOH352 4.6 32.9 1.0
CD2 A:LEU66 4.7 17.9 1.0
ND1 A:HIS31 4.9 16.3 1.0

Reference:

J.Pierce, D.A.Myles. Making Hydrogens Stand Out: Enhanced Neutron Diffraction From Biological Crystals Using Dynamic Nuclear Polarization To Be Published.
Page generated: Mon Jul 29 13:22:04 2024

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