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Chlorine in PDB 6phi: Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution

Protein crystallography data

The structure of Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution, PDB code: 6phi was solved by P.A.Mroz, G.Gonzalez-Gutierrez, R.D.Dimarchi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.61 / 1.10
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 42.555, 42.555, 28.376, 90.00, 90.00, 90.00
R / Rfree (%) 13.6 / 13.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution (pdb code 6phi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution, PDB code: 6phi:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6phi

Go back to Chlorine Binding Sites List in 6phi
Chlorine binding site 1 out of 2 in the Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl101

b:61.7
occ:1.00
HE A:ARG18 2.1 17.8 1.0
NE A:ARG18 3.0 14.8 1.0
HH21 A:ARG18 3.1 23.0 1.0
HA A:ARG18 3.2 8.8 1.0
O A:HOH221 3.5 33.4 1.0
O A:HOH213 3.5 18.3 1.0
HD3 A:ARG18 3.6 14.6 1.0
HB2 A:ARG18 3.6 9.7 1.0
O A:HOH201 3.7 36.5 1.0
NH2 A:ARG18 3.7 19.1 1.0
CZ A:ARG18 3.8 17.7 1.0
CD A:ARG18 3.8 12.1 1.0
CA A:ARG18 4.0 7.3 1.0
CB A:ARG18 4.2 8.1 1.0
N A:ARG18 4.4 7.2 1.0
HB3 A:ASP21 4.5 12.3 1.0
HB3 A:ARG17 4.5 13.9 1.0
HB2 A:ASP21 4.5 12.3 1.0
HH22 A:ARG18 4.5 23.0 1.0
O A:HOH229 4.6 43.0 1.0
HD2 A:ARG18 4.6 14.6 1.0
CG A:ARG18 4.6 10.3 1.0
O A:ARG17 4.7 8.1 1.0
HE A:ARG17 4.7 24.5 1.0
C A:ARG17 4.7 7.7 1.0
H A:ARG18 4.7 8.7 1.0
HB2 A:ARG17 4.9 13.9 1.0
CB A:ASP21 4.9 10.2 1.0
HH21 A:ARG17 4.9 28.0 1.0
OD2 A:ASP21 5.0 13.4 1.0

Chlorine binding site 2 out of 2 in 6phi

Go back to Chlorine Binding Sites List in 6phi
Chlorine binding site 2 out of 2 in the Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Native Glucagon in Space Group I41 at 1.1 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl102

b:35.3
occ:1.00
HG1 A:THR7 2.3 17.0 1.0
H A:THR7 2.6 11.2 1.0
O A:HOH224 2.7 48.4 1.0
HA3 A:GLY4 2.8 16.5 1.0
H A:GLY4 2.8 16.9 1.0
HB3 A:PHE6 3.0 11.8 1.0
OG1 A:THR7 3.1 14.1 1.0
O A:HOH218 3.3 26.2 1.0
CA A:GLY4 3.3 13.7 1.0
N A:GLY4 3.4 14.0 1.0
HB A:THR7 3.4 14.8 1.0
N A:THR7 3.4 9.3 1.0
H A:PHE6 3.5 12.7 1.0
C A:GLY4 3.7 12.8 1.0
CB A:THR7 3.7 12.3 1.0
CB A:PHE6 3.9 9.8 1.0
O A:GLY4 3.9 12.2 1.0
N A:PHE6 4.0 10.6 1.0
HD1 A:PHE6 4.2 12.9 1.0
CA A:THR7 4.2 9.7 1.0
HA2 A:GLY4 4.2 16.5 1.0
HB2 A:PHE6 4.2 11.8 1.0
CA A:PHE6 4.3 9.7 1.0
N A:THR5 4.3 13.3 1.0
C A:PHE6 4.3 9.1 1.0
H A:THR5 4.5 16.0 1.0
C A:GLN3 4.6 14.7 1.0
HA A:GLN3 4.6 19.2 1.0
HA A:THR7 4.7 11.7 1.0
CD1 A:PHE6 4.9 10.7 1.0
C A:THR5 4.9 11.6 1.0
CG A:PHE6 4.9 9.4 1.0
H A:SER8 4.9 10.0 1.0
H A:SER8 4.9 10.2 0.0

Reference:

P.A.Mroz, G.Gonzalez-Gutierrez, R.D.Dimarchi. High Resolution X-Ray Structure of Glucagon and Selected Stereo-Inversed Analogs in Novel Crystallographic Packing Arrangement. To Be Published.
Page generated: Mon Jul 29 13:22:21 2024

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