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Chlorine in PDB 6pmh: Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus

Protein crystallography data

The structure of Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus, PDB code: 6pmh was solved by V.Carbone, L.R.Schofield, A.J.Sutherland-Smith, R.S.Ronimus, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.27 / 2.30
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 113.815, 113.815, 239.873, 90.00, 90.00, 120.00
R / Rfree (%) 14.7 / 17.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus (pdb code 6pmh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus, PDB code: 6pmh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6pmh

Go back to Chlorine Binding Sites List in 6pmh
Chlorine binding site 1 out of 2 in the Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:63.3
occ:1.00
O A:HOH708 2.9 45.9 1.0
O A:HOH665 3.1 24.7 1.0
OG A:SER148 3.2 25.6 1.0
CB A:SER148 3.9 24.4 1.0
CB A:ASP137 4.2 59.5 1.0
CA A:SER148 4.5 24.9 1.0
CB A:SER150 4.6 22.3 1.0
O A:HOH661 4.7 32.9 1.0
CG A:ASP137 4.7 64.8 1.0
N A:ASP137 4.8 54.4 1.0
O A:HOH629 5.0 43.4 1.0

Chlorine binding site 2 out of 2 in 6pmh

Go back to Chlorine Binding Sites List in 6pmh
Chlorine binding site 2 out of 2 in the Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:57.5
occ:1.00
OE2 A:GLU242 3.2 40.8 1.0
N A:ARG241 3.4 32.9 1.0
CG A:ARG241 3.9 55.0 1.0
CA A:ARG240 3.9 30.6 1.0
CB A:ARG241 4.0 45.3 1.0
C A:ARG240 4.2 31.2 1.0
O A:VAL239 4.2 37.3 1.0
CA A:ARG241 4.3 36.4 1.0
CD A:GLU242 4.4 45.0 1.0
CD A:ARG240 4.4 39.3 1.0
CB A:ARG240 4.7 31.6 1.0
NE A:ARG240 4.8 46.3 1.0
N A:ARG240 4.9 32.3 1.0
C A:VAL239 4.9 34.4 1.0

Reference:

V.Carbone, L.R.Schofield, A.J.Sutherland-Smith, R.S.Ronimus. Structure of A Udp-Gale 4-Epimerase (MTH375) From the Thermophilic Pseudomurein-Containing Methanogen Methanothermobacter Thermautotrophicus To Be Published.
Page generated: Mon Jul 29 13:25:23 2024

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