Chlorine in PDB 6pu1: Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide

The structure of Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide, PDB code: 6pu1 was solved by J.J.Lindenberger, M.Kvaratskhelia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.00 / 2.28
Space group	P 6
Cell size a, b, c (Å), α, β, γ (°)	92.58, 92.58, 58.019, 90, 90, 120
R / Rfree (%)	23.2 / 27.2

The structure of Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide also contains other interesting chemical elements:

Iodine

(I)

3 atoms

The binding sites of Chlorine atom in the Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide (pdb code 6pu1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide, PDB code: 6pu1:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:70.8 occ:1.00 NH1 A:ARG167 3.6 66.2 1.0 CD1 A:ILE153 3.9 59.5 1.0 CD A:ARG167 3.9 58.0 1.0 CB A:ARG167 4.4 54.0 1.0 CG A:ARG167 4.5 49.2 1.0 CZ A:ARG167 4.6 65.8 1.0 NE A:ARG167 4.7 63.2 1.0 OG1 A:THR171 4.8 63.2 1.0 CG2 A:THR148 4.8 58.1 1.0

Chlorine binding site 2 out of 3 in the Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl304 b:75.7 occ:1.00 N A:ARG97 3.2 69.7 1.0 CG A:ARG97 3.4 69.4 1.0 CG A:MET96 3.6 99.0 1.0 CB A:ARG97 3.6 70.6 1.0 CD A:ARG97 3.8 71.2 1.0 CA A:MET96 4.0 93.4 1.0 CA A:ARG97 4.0 72.5 1.0 OE1 A:GLU113 4.0 77.5 1.0 C A:MET96 4.1 80.1 1.0 NE A:ARG97 4.3 70.0 1.0 CB A:MET96 4.4 94.4 1.0 CG2 A:ILE91 4.4 74.6 1.0 CG1 A:ILE91 4.4 71.5 1.0 CB A:ILE91 4.8 76.3 1.0 CG A:GLU113 4.9 68.0 1.0 CD A:GLU113 4.9 74.1 1.0 SD A:MET96 5.0 104.0 1.0 O A:ARG97 5.0 78.8 1.0

Chlorine binding site 3 out of 3 in the Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl306 b:58.2 occ:1.00 O A:GLY60 2.8 63.4 1.0 CD2 A:HIS62 3.4 67.1 1.0 NE2 A:HIS62 3.4 68.6 1.0 CG1 A:VAL27 3.9 59.6 1.0 C A:GLY60 4.0 58.9 1.0 CG A:GLU28 4.0 76.2 1.0 CA A:GLU28 4.4 71.5 1.0 N A:GLU28 4.4 66.1 1.0 O A:VAL27 4.5 67.2 1.0 C A:VAL27 4.5 65.3 1.0 N A:GLY60 4.6 54.7 1.0 CG A:HIS62 4.6 64.9 1.0 CG1 A:VAL59 4.7 47.9 1.0 CE1 A:HIS62 4.7 69.9 1.0 CB A:VAL27 4.7 61.6 1.0 CA A:GLY60 4.8 54.9 1.0 CB A:GLU28 4.8 72.6 1.0 N A:GLY61 4.9 59.7 1.0 CA A:GLY61 5.0 60.6 1.0

J.J.Lindenberger, M.Kvaratskhelia. Cysteine Stabilized Hexameric Hiv-1 Ca in Complex with SEC24C Peptide To Be Published.