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Chlorine in PDB 6qd6: Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications: Crystal Structure of Mb-Chopq-NB207

Protein crystallography data

The structure of Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications: Crystal Structure of Mb-Chopq-NB207, PDB code: 6qd6 was solved by T.Uchanski, S.Masiulis, B.Fischer, V.Kalichuk, A.Wohlkonig, T.Zogg, H.Remaut, W.Vranken, A.R.Aricescu, E.Pardon, J.Steyaert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.45 / 2.84
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 71.170, 92.920, 244.220, 92.05, 96.93, 112.15
R / Rfree (%) 20.4 / 23.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications: Crystal Structure of Mb-Chopq-NB207 (pdb code 6qd6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications: Crystal Structure of Mb-Chopq-NB207, PDB code: 6qd6:

Chlorine binding site 1 out of 1 in 6qd6

Go back to Chlorine Binding Sites List in 6qd6
Chlorine binding site 1 out of 1 in the Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications: Crystal Structure of Mb-Chopq-NB207


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications: Crystal Structure of Mb-Chopq-NB207 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:91.7
occ:1.00
NH2 A:ARG507 3.0 81.9 1.0
NH2 A:ARG505 3.2 65.9 1.0
CZ A:ARG507 4.1 90.7 1.0
NE A:ARG507 4.4 74.4 1.0
CZ A:ARG505 4.4 83.0 1.0
NH1 A:ARG505 4.8 71.9 1.0
CG A:GLU518 4.8 96.6 1.0

Reference:

T.Uchanski, S.Masiulis, B.Fischer, V.Kalichuk, A.Wohlkonig, T.Zogg, H.Remaut, W.Vranken, A.R.Aricescu, E.Pardon, J.Steyaert. Molecular Scaffolds Expand the Nanobody Toolkit For Cryo-Em Applications To Be Published.
Page generated: Mon Jul 29 13:54:43 2024

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