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Chlorine in PDB 6qgh: Structure of Human Bcl-2 in Complex with Abt-263

Protein crystallography data

The structure of Structure of Human Bcl-2 in Complex with Abt-263, PDB code: 6qgh was solved by P.Dokurno, J.Murray, J.Davidson, I.Chen, B.Davis, C.J.Graham, R.Harris, A.M.Jordan, N.Matassova, C.Pedder, S.Ray, S.Roughley, J.Smith, C.Walmsley, Y.Wang, N.Whitehead, D.S.Williamson, P.Casara, T.Le Diguarher, J.Hickman, J.Stark, A.Kotschy, O.Geneste, R.E.Hubbard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.419, 55.110, 64.690, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 20.6

Other elements in 6qgh:

The structure of Structure of Human Bcl-2 in Complex with Abt-263 also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Human Bcl-2 in Complex with Abt-263 (pdb code 6qgh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Human Bcl-2 in Complex with Abt-263, PDB code: 6qgh:

Chlorine binding site 1 out of 1 in 6qgh

Go back to Chlorine Binding Sites List in 6qgh
Chlorine binding site 1 out of 1 in the Structure of Human Bcl-2 in Complex with Abt-263


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Human Bcl-2 in Complex with Abt-263 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:24.5
occ:1.00
CL6 A:1XJ401 0.0 24.5 1.0
C24 A:1XJ401 1.7 24.1 1.0
C15 A:1XJ401 2.7 23.6 1.0
C14 A:1XJ401 2.7 22.4 1.0
CD1 A:PHE112 3.7 28.9 1.0
N A:PHE153 4.0 19.2 1.0
C5 A:1XJ401 4.0 25.1 1.0
C4 A:1XJ401 4.0 24.0 1.0
CE1 A:PHE104 4.0 20.6 1.0
CA A:PHE153 4.1 20.3 1.0
CB A:GLU152 4.1 22.9 1.0
C A:GLU152 4.1 21.2 1.0
CE1 A:PHE112 4.3 27.9 1.0
CA A:PHE112 4.3 24.6 1.0
CG2 A:VAL156 4.3 22.4 1.0
O A:GLU152 4.4 20.9 1.0
CG A:PHE112 4.5 28.0 1.0
C17 A:1XJ401 4.5 23.5 1.0
O A:ALA149 4.5 17.9 1.0
CB A:PHE153 4.6 19.7 1.0
CB A:PHE112 4.7 26.0 1.0
CZ A:PHE104 4.8 22.0 1.0
CA A:GLU152 4.8 22.2 1.0
CB A:MET115 4.8 27.5 1.0
CG A:MET115 4.9 28.2 1.0
CD1 A:PHE104 4.9 20.5 1.0

Reference:

J.B.Murray, J.Davidson, I.Chen, B.Davis, P.Dokurno, C.J.Graham, R.Harris, A.Jordan, N.Matassova, C.Pedder, S.Ray, S.D.Roughley, J.Smith, C.Walmsley, Y.Wang, N.Whitehead, D.S.Williamson, P.Casara, T.Le Diguarher, J.Hickman, J.Stark, A.Kotschy, O.Geneste, R.E.Hubbard. Establishing Drug Discovery and Identification of Hit Series For the Anti-Apoptotic Proteins, Bcl-2 and Mcl-1. Acs Omega V. 4 8892 2019.
ISSN: ESSN 2470-1343
PubMed: 31459977
DOI: 10.1021/ACSOMEGA.9B00611
Page generated: Mon Jul 29 13:57:04 2024

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