Atomistry » Chlorine » PDB 6qig-6qp7 » 6qla
Atomistry »
  Chlorine »
    PDB 6qig-6qp7 »
      6qla »

Chlorine in PDB 6qla: Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library

Enzymatic activity of Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library

All present enzymatic activity of Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library:
3.1.1.3;

Protein crystallography data

The structure of Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library, PDB code: 6qla was solved by K.M.Boyko, D.Garsia, A.Y.Nikolaeva, D.A.Korzhenevskiy, M.V.Kryukova, L.E.Petrovskaya, K.A.Novototskaya-Vlasova, E.M.Rivkina, D.A.Dolgikh, M.P.Kirpichnikov, V.O.Popov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.46 / 1.43
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.140, 92.180, 74.460, 90.00, 106.41, 90.00
R / Rfree (%) 15.6 / 18.4

Other elements in 6qla:

The structure of Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library (pdb code 6qla). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library, PDB code: 6qla:

Chlorine binding site 1 out of 1 in 6qla

Go back to Chlorine Binding Sites List in 6qla
Chlorine binding site 1 out of 1 in the Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the PMGL2 Esterase (Point Mutant 1) From Permafrost Metagenomic Library within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:11.2
occ:1.00
O B:HOH727 3.0 26.3 1.0
N B:LEU294 3.2 9.4 1.0
N A:LEU294 3.3 8.7 1.0
NE2 A:HIS282 3.3 9.9 1.0
NE2 B:HIS282 3.4 9.3 1.0
CA B:GLU293 3.6 9.9 1.0
CA A:GLU293 3.6 10.2 1.0
CE1 A:HIS282 3.6 9.9 1.0
CE1 B:HIS282 3.6 9.9 1.0
C B:GLU293 3.9 10.4 1.0
O B:LEU294 3.9 10.2 1.0
O A:LEU294 3.9 9.2 1.0
C A:GLU293 3.9 10.5 1.0
CG B:GLU293 4.1 13.9 1.0
CG A:GLU293 4.1 15.0 1.0
O B:SER292 4.2 11.1 1.0
O A:SER292 4.2 11.2 1.0
CA A:LEU294 4.3 9.1 1.0
CA B:LEU294 4.3 9.5 1.0
CB B:GLU293 4.3 11.7 1.0
CB A:GLU293 4.3 11.6 1.0
CB B:LEU294 4.4 10.7 1.0
CB A:LEU294 4.4 9.2 1.0
C B:LEU294 4.5 10.4 1.0
C A:LEU294 4.5 9.0 1.0
CD2 B:HIS282 4.6 8.9 1.0
CD2 A:HIS282 4.6 9.3 1.0
N A:GLU293 4.6 10.3 1.0
N B:GLU293 4.6 9.6 1.0
C A:SER292 4.8 11.0 1.0
C B:SER292 4.8 9.9 1.0
ND1 A:HIS282 4.8 8.7 1.0
ND1 B:HIS282 4.8 8.6 1.0

Reference:

K.M.Boyko, M.V.Kryukova, A.Y.Nikolaeva, D.A.Korzhenevskiy, L.E.Petrovskaya, K.A.Novototskaya-Vlasova, E.M.Rivkina, D.A.Dolgikh, M.P.Kirpichnikov, V.O.Popov. Crystal Structure of the PMGL2 Esterase with Gcsag Motif Around the Catalytic Serine To Be Published.
Page generated: Mon Jul 29 14:00:14 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy