Chlorine in PDB 6qn8: Structure of Bovine Anti-Rsv Fab B13

The structure of Structure of Bovine Anti-Rsv Fab B13, PDB code: 6qn8 was solved by J.Ren, J.E.Nettleship, G.Harris, W.Mwangi, N.Rhaman, C.Grant, A.Kotecha, E.Fry, B.Charleston, D.I.Stuart, J.Hammond, R.J.Owens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	87.07 / 2.12
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	87.908, 132.457, 118.183, 90.00, 102.93, 90.00
R / Rfree (%)	23.5 / 26.7

The binding sites of Chlorine atom in the Structure of Bovine Anti-Rsv Fab B13 (pdb code 6qn8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Bovine Anti-Rsv Fab B13, PDB code: 6qn8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of Bovine Anti-Rsv Fab B13


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Bovine Anti-Rsv Fab B13 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl301 b:57.4 occ:1.00 CG2 B:THR160 3.4 45.6 1.0 CD D:PRO60 3.5 28.7 1.0 NH2 D:ARG46 3.5 40.9 1.0 CG D:PRO60 3.5 28.8 1.0 O B:HOH559 4.0 33.9 1.0 CE2 D:PHE63 4.1 29.0 1.0 NH1 D:ARG62 4.1 40.9 1.0 NH2 D:ARG62 4.2 40.0 1.0 O D:HOH350 4.3 33.2 1.0 O D:HOH351 4.3 36.7 1.0 NH1 D:ARG46 4.4 42.7 1.0 CZ D:ARG46 4.4 41.7 1.0 CZ D:ARG62 4.5 39.7 1.0 CG2 B:THR158 4.6 32.5 1.0 CB B:THR160 4.7 45.2 1.0 CZ D:PHE63 4.8 28.9 1.0 CB D:PRO60 4.9 29.2 1.0 N D:PRO60 5.0 29.4 1.0 CD2 D:PHE63 5.0 28.3 1.0

Chlorine binding site 2 out of 2 in the Structure of Bovine Anti-Rsv Fab B13


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Bovine Anti-Rsv Fab B13 within 5.0Å range: probe atom residue distance (Å) B Occ J:Cl301 b:56.4 occ:1.00 O J:HOH475 3.1 22.1 1.0 O J:HOH487 3.4 42.4 1.0 N J:CYS100 3.5 25.3 1.0 ND2 J:ASN33 3.5 20.9 1.0 CB J:HIS116 3.6 26.8 1.0 CD2 J:HIS116 3.7 27.4 1.0 CG J:HIS116 3.9 27.1 1.0 O J:LEU98 3.9 21.7 1.0 CB J:CYS100 3.9 28.2 1.0 SG J:CYS100 4.0 28.7 1.0 CA J:GLY99 4.2 21.9 1.0 CA J:CYS100 4.3 27.3 1.0 C J:GLY99 4.3 23.9 1.0 CG J:ASN33 4.6 20.6 1.0 O J:CYS100 4.7 28.4 1.0 O J:HOH448 4.7 15.4 1.0 NE2 J:HIS116 4.7 27.6 1.0 C J:LEU98 4.8 21.4 1.0 C J:CYS100 4.9 28.9 1.0 ND1 J:HIS116 5.0 27.6 1.0 N J:GLY99 5.0 21.4 1.0

J.Ren, J.E.Nettleship, G.Harris, W.Mwangi, N.Rhaman, C.Grant, A.Kotecha, E.Fry, B.Charleston, D.I.Stuart, J.Hammond, R.J.Owens. The Role of the Light Chain in the Structure and Binding Activity of Two Cattle Antibodies That Neutralize Bovine Respiratory Syncytial Virus. Mol.Immunol. V. 112 123 2019.
ISSN: ISSN 0161-5890
PubMed: 31100550
DOI: 10.1016/J.MOLIMM.2019.04.026