Chlorine in PDB 6qy5: Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip)

All present enzymatic activity of Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip):
3.2.1.17;

The structure of Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip), PDB code: 6qy5 was solved by J.Lieske, A.Tolstikova, A.Meents, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.54 / 1.84
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	79.860, 79.860, 38.020, 90.00, 90.00, 90.00
R / Rfree (%)	16.8 / 20.2

The structure of Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip) also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Chlorine atom in the Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip) (pdb code 6qy5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip), PDB code: 6qy5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:27.5 occ:1.00 HD22 A:ASN113 2.4 31.8 1.0 HB2 A:ASN113 2.8 24.7 1.0 HA A:ALA110 3.2 25.5 1.0 HG12 A:VAL109 3.2 33.6 0.6 ND2 A:ASN113 3.3 26.5 1.0 HG22 A:VAL109 3.5 33.8 0.4 CB A:ASN113 3.5 20.6 1.0 HB3 A:ASN113 3.5 24.7 1.0 HD2 A:ARG114 3.7 31.7 1.0 HG3 A:ARG114 3.8 30.6 1.0 CG A:ASN113 3.9 21.9 1.0 HD21 A:ASN113 3.9 31.8 1.0 CA A:ALA110 4.1 21.2 1.0 HG13 A:VAL109 4.1 31.4 0.4 CG1 A:VAL109 4.2 28.0 0.6 O A:VAL109 4.2 20.3 1.0 HB2 A:ALA110 4.2 26.1 1.0 HG11 A:VAL109 4.3 33.6 0.6 CG2 A:VAL109 4.4 28.1 0.4 CD A:ARG114 4.4 26.4 1.0 N A:ALA110 4.5 19.7 1.0 C A:VAL109 4.5 20.3 1.0 CG A:ARG114 4.5 25.5 1.0 HG21 A:VAL109 4.5 33.8 0.4 HD3 A:ARG114 4.6 31.7 1.0 HG13 A:VAL109 4.6 33.6 0.6 CB A:ALA110 4.6 21.7 1.0 HB1 A:ALA110 4.7 26.1 1.0 H A:ASN113 4.7 22.1 1.0 HG2 A:ARG114 4.8 30.6 1.0 CG1 A:VAL109 4.9 26.1 0.4 CA A:ASN113 4.9 20.6 1.0 H A:ALA110 5.0 23.6 1.0 HG11 A:VAL109 5.0 31.4 0.4

Chlorine binding site 2 out of 2 in the Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl204 b:35.5 occ:1.00 H A:GLY26 2.2 22.5 1.0 HG A:SER24 2.6 30.6 1.0 HB2 A:SER24 2.8 32.4 1.0 OG A:SER24 2.9 25.5 1.0 HA3 A:GLY26 3.0 22.5 1.0 HA A:GLN121 3.0 32.6 1.0 N A:GLY26 3.0 18.7 1.0 HD11 A:ILE124 3.2 42.1 1.0 CB A:SER24 3.3 27.0 1.0 HD13 A:ILE124 3.4 42.1 1.0 CA A:GLY26 3.5 18.7 1.0 HG23 A:VAL120 3.5 30.1 1.0 HG2 A:GLN121 3.6 53.1 1.0 HB2 A:GLN121 3.7 42.6 1.0 CD1 A:ILE124 3.7 35.1 1.0 CA A:GLN121 3.8 27.1 1.0 H A:LEU25 3.8 24.9 1.0 HG12 A:ILE124 3.8 36.5 1.0 N A:LEU25 3.9 20.8 1.0 HB3 A:SER24 4.0 32.4 1.0 CB A:GLN121 4.1 35.5 1.0 HA2 A:GLY26 4.1 22.5 1.0 C A:SER24 4.2 23.3 1.0 N A:GLN121 4.2 26.9 1.0 C A:LEU25 4.2 22.4 1.0 HB3 A:LEU25 4.2 26.8 1.0 CG A:GLN121 4.2 44.3 1.0 H A:ASN27 4.3 21.6 1.0 CG1 A:ILE124 4.3 30.4 1.0 CA A:SER24 4.4 23.8 1.0 HG3 A:GLN121 4.4 53.1 1.0 CG2 A:VAL120 4.5 25.1 1.0 H A:GLN121 4.5 32.3 1.0 O A:VAL120 4.5 23.1 1.0 CA A:LEU25 4.5 20.0 1.0 C A:VAL120 4.5 29.7 1.0 HD12 A:ILE124 4.6 42.1 1.0 C A:GLY26 4.6 18.4 1.0 HG21 A:VAL120 4.6 30.1 1.0 O A:SER24 4.7 18.8 1.0 N A:ASN27 4.7 18.0 1.0 CB A:LEU25 4.9 22.4 1.0 HA A:SER24 4.9 28.6 1.0 HG13 A:ILE124 4.9 36.5 1.0 HG21 A:ILE124 4.9 30.7 1.0 HB A:VAL120 4.9 29.0 1.0 HG23 A:ILE124 5.0 30.7 1.0 HD22 A:ASN27 5.0 27.5 1.0

A.Tolstikova, M.Levantino, O.Yefanov, V.Hennicke, P.Fischer, J.Meyer, A.Mozzanica, S.Redford, E.Crosas, N.L.Opara, M.Barthelmess, J.Lieske, D.Oberthuer, E.Wator, I.Mohacsi, M.Wulff, B.Schmitt, H.N.Chapman, A.Meents. 1 Khz Fixed-Target Serial Crystallography Using A Multilayer Monochromator and An Integrating Pixel Detector. Iucrj V. 6 927 2019.
ISSN: ESSN 2052-2525
PubMed: 31576225
DOI: 10.1107/S205225251900914X