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Chlorine in PDB 6r2f: Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation

Protein crystallography data

The structure of Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation, PDB code: 6r2f was solved by J.M.Dunce, O.R.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.41 / 2.29
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.860, 104.510, 127.510, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 26.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation (pdb code 6r2f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation, PDB code: 6r2f:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6r2f

Go back to Chlorine Binding Sites List in 6r2f
Chlorine binding site 1 out of 2 in the Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:63.0
occ:0.89
CD1 A:LEU75 3.4 52.0 1.0
OH A:TYR71 3.5 54.7 1.0
O2 A:MPD201 3.5 54.1 0.8
NH1 D:ARG107 3.7 62.7 1.0
CG A:LEU75 3.8 49.3 1.0
O D:LEU103 4.2 45.4 1.0
CD D:ARG107 4.2 59.6 1.0
CB D:LEU103 4.2 43.1 1.0
C D:LEU103 4.2 45.9 1.0
CE2 A:TYR71 4.3 43.7 1.0
CZ A:TYR71 4.3 48.2 1.0
N D:ILE104 4.4 59.6 1.0
CG1 D:ILE104 4.5 65.3 1.0
CB A:LEU75 4.5 47.2 1.0
CA D:ILE104 4.5 58.2 1.0
C2 A:MPD201 4.6 56.2 0.8
CB D:ARG107 4.6 48.9 1.0
CZ D:ARG107 4.7 58.2 1.0
CM A:MPD201 4.7 51.8 0.8
NE D:ARG107 4.9 60.2 1.0
CA D:LEU103 4.9 42.4 1.0
CG D:ARG107 4.9 52.3 1.0
C3 A:MPD201 5.0 57.1 0.8

Chlorine binding site 2 out of 2 in 6r2f

Go back to Chlorine Binding Sites List in 6r2f
Chlorine binding site 2 out of 2 in the Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of TEX12 F102A F109E V116A in An Alternative Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl205

b:68.4
occ:1.00
OH D:TYR71 3.3 51.1 1.0
O4 D:MPD202 3.3 51.6 1.0
CD1 D:LEU75 3.5 38.7 1.0
CG D:LEU75 3.8 38.9 1.0
CE2 D:TYR71 4.0 38.9 1.0
CZ D:TYR71 4.1 46.2 1.0
CB D:LEU75 4.3 37.3 1.0
C5 D:MPD202 4.4 43.5 1.0
C4 D:MPD202 4.5 48.8 1.0
CA D:LEU75 5.0 37.2 1.0

Reference:

J.M.Dunce, L.J.Salmon, O.R.Davies. Meiotic Synaptonemal Complex Extension Through Fibrous Assembly of SYCE2-TEX12 To Be Published.
Page generated: Mon Jul 29 14:19:35 2024

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