Chlorine in PDB 6r38: T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid

Protein crystallography data

The structure of T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid, PDB code: 6r38 was solved by L.Muenzker, J.K.Petrick, C.Schleberger, W.Jahnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.66 / 2.33
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 60.839, 60.839, 339.990, 90.00, 90.00, 120.00
R / Rfree (%) 22.4 / 24.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid (pdb code 6r38). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid, PDB code: 6r38:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6r38

Go back to Chlorine Binding Sites List in 6r38
Chlorine binding site 1 out of 2 in the T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:95.4
occ:0.76
CL9 A:JQE401 0.0 95.4 0.8
C1 A:JQE401 1.8 90.1 0.8
C2 A:JQE401 2.7 87.9 0.8
S3 A:JQE401 3.0 85.1 0.8
C6 A:JQE401 3.1 86.2 0.8
CE1 A:PHE251 3.5 75.6 1.0
C4 A:JQE401 4.0 85.5 0.8
C5 A:JQE401 4.2 83.8 0.8
CZ A:PHE251 4.2 76.6 1.0
C7 A:JQE401 4.2 87.0 0.8
CD1 A:PHE251 4.5 75.0 1.0
O13 A:JQE401 4.7 88.1 0.8

Chlorine binding site 2 out of 2 in 6r38

Go back to Chlorine Binding Sites List in 6r38
Chlorine binding site 2 out of 2 in the T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl) Acetic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:79.6
occ:0.76
CL5 A:JQE401 0.0 79.6 0.8
C12 A:JQE401 1.7 81.7 0.8
C8 A:JQE401 2.7 83.5 0.8
C14 A:JQE401 2.7 81.8 0.8
O A:THR217 3.1 61.8 1.0
CG2 A:THR217 3.5 57.7 1.0
CD1 A:LEU358 3.6 91.4 1.0
CG A:ARG50 4.0 51.5 1.0
C A:THR217 4.0 62.5 1.0
C4 A:JQE401 4.0 85.5 0.8
C10 A:JQE401 4.0 82.1 0.8
CB A:ASN49 4.2 70.7 1.0
N A:ARG50 4.2 67.0 1.0
C A:ASN49 4.2 71.8 1.0
CE1 A:TYR218 4.3 65.9 1.0
CA A:ARG50 4.3 65.9 1.0
O A:ASN49 4.3 71.7 1.0
CZ A:TYR218 4.4 74.9 1.0
CD1 A:TYR218 4.5 64.7 1.0
C5 A:JQE401 4.5 83.8 0.8
OG1 A:THR53 4.6 76.3 1.0
CA A:THR217 4.6 57.0 1.0
CB A:THR217 4.7 61.5 1.0
CB A:ARG50 4.8 60.3 1.0
CE2 A:TYR218 4.8 64.1 1.0
N A:TYR218 4.8 60.1 1.0
OH A:TYR218 4.9 76.5 1.0
CG A:TYR218 4.9 62.8 1.0
CA A:ASN49 4.9 68.5 1.0
CG A:LEU358 4.9 92.0 1.0
CD2 A:TYR218 5.0 63.2 1.0
CA A:TYR218 5.0 60.8 1.0

Reference:

L.Muenzker, J.Wolfgang. T. Brucei Fpps in Complex with 2-(2,5-Dichlorobenzo[B]Thiophen-3-Yl)Acetic Acid To Be Published.
Page generated: Sat Dec 12 13:35:28 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy