Chlorine in PDB 6rca: X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A

All present enzymatic activity of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A:
2.4.2.3;

The structure of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A, PDB code: 6rca was solved by I.I.Prokofev, P.A.Eistrikh-Geller, V.V.Balaev, A.G.Gabdoulkhakov, C.Betzel, A.A.Lashkov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.60 / 1.35
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	93.245, 93.245, 152.928, 90.00, 90.00, 120.00
R / Rfree (%)	13.5 / 16.9

The structure of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Sodium	(Na)	3 atoms

The binding sites of Chlorine atom in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A (pdb code 6rca). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A, PDB code: 6rca:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl301 b:26.7 occ:1.00 O C:HOH649 2.6 54.8 1.0 O C:HOH564 2.7 11.9 1.0 N C:PHE133 3.0 6.3 1.0 CB C:PHE133 3.5 8.2 1.0 CA C:ASP132 3.8 7.5 1.0 CA C:PHE133 3.8 7.7 1.0 C C:ASP132 3.8 6.5 1.0 O C:HOH416 3.9 39.6 1.0 OD1 C:ASP132 3.9 12.9 1.0 O B:MET152 3.9 9.7 1.0 CG2 B:THR110 3.9 10.2 1.0 OG1 B:THR110 4.2 9.2 1.0 CB B:MET152 4.2 9.4 1.0 O C:HOH682 4.2 31.1 1.0 O C:PRO131 4.2 7.6 1.0 C B:MET152 4.3 8.2 1.0 CG C:ASP132 4.3 9.7 1.0 CA B:GLY153 4.4 7.9 1.0 CB B:THR110 4.5 9.1 1.0 N B:GLY153 4.6 7.0 1.0 CB C:ASP132 4.6 8.7 1.0 O B:HOH521 4.7 28.9 1.0 O C:HOH600 4.8 11.3 1.0 N C:ASP132 4.8 6.7 1.0 CG C:PHE133 4.9 9.2 1.0 CA B:MET152 5.0 8.4 1.0 C C:PRO131 5.0 6.6 1.0 C C:PHE133 5.0 8.3 1.0

Chlorine binding site 2 out of 2 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A within 5.0Å range: probe atom residue distance (Å) B Occ F:Cl306 b:24.9 occ:1.00 O F:HOH547 2.8 11.1 1.0 N F:PHE133 3.0 8.0 1.0 O A:HOH681 3.2 39.5 0.4 CB F:PHE133 3.5 8.1 1.0 CA F:ASP132 3.8 7.5 1.0 O A:HOH681 3.8 40.6 0.6 O A:MET152 3.8 11.7 1.0 CG2 A:THR110 3.8 9.2 1.0 CA F:PHE133 3.8 7.2 1.0 C F:ASP132 3.9 7.2 1.0 OD1 F:ASP132 3.9 11.8 1.0 O F:HOH418 3.9 36.0 1.0 CB A:MET152 4.0 9.5 1.0 C A:MET152 4.1 8.4 1.0 OG1 A:THR110 4.2 9.1 1.0 O F:HOH692 4.2 26.5 1.0 O F:PRO131 4.2 7.0 1.0 CG F:ASP132 4.3 10.4 1.0 CB A:THR110 4.4 7.9 1.0 CA A:GLY153 4.5 8.3 1.0 N A:GLY153 4.5 7.8 1.0 CB F:ASP132 4.6 9.0 1.0 O A:HOH564 4.7 25.9 1.0 O F:HOH579 4.7 10.3 1.0 CA A:MET152 4.8 8.8 1.0 N F:ASP132 4.8 7.0 1.0 CG F:PHE133 4.9 8.8 1.0 OD2 F:ASP132 5.0 10.6 1.0 C F:PRO131 5.0 6.5 1.0 C F:PHE133 5.0 7.2 1.0 N F:ASP134 5.0 9.0 1.0

I.I.Prokofev, P.A.Eistrikh-Geller, V.V.Balaev, A.G.Gabdoulkhakov, C.Betzel, A.A.Lashkov. X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A. To Be Published.