Chlorine in PDB 6rd2: Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2
Protein crystallography data
The structure of Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2, PDB code: 6rd2
was solved by
M.Barone,
Y.Roske,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
42.11 /
1.00
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
148.390,
44.000,
34.830,
90.00,
102.17,
90.00
|
R / Rfree (%)
|
19.8 /
22.4
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2
(pdb code 6rd2). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2, PDB code: 6rd2:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 6rd2
Go back to
Chlorine Binding Sites List in 6rd2
Chlorine binding site 1 out
of 2 in the Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl101
b:20.1
occ:1.00
|
CL1
|
C:K1N101
|
0.0
|
20.1
|
1.0
|
CD1
|
C:K1N101
|
1.7
|
18.9
|
1.0
|
CE1
|
C:K1N101
|
2.6
|
19.6
|
1.0
|
CG
|
C:K1N101
|
2.7
|
19.2
|
1.0
|
HA
|
C:K1N101
|
2.8
|
26.2
|
1.0
|
HE1
|
C:K1N101
|
2.8
|
23.6
|
1.0
|
HB2
|
C:K1N101
|
2.8
|
24.0
|
1.0
|
HG3
|
B:GLN79
|
2.9
|
24.4
|
1.0
|
HG13
|
B:VAL86
|
3.0
|
22.8
|
1.0
|
CB
|
C:K1N101
|
3.1
|
20.0
|
1.0
|
HD3
|
B:ARG81
|
3.1
|
30.5
|
1.0
|
HB3
|
B:ARG81
|
3.4
|
25.6
|
1.0
|
HB2
|
B:GLN79
|
3.4
|
21.5
|
1.0
|
CA
|
C:K1N101
|
3.5
|
21.8
|
1.0
|
HAQ
|
C:K1N101
|
3.5
|
27.4
|
1.0
|
HE21
|
B:GLN79
|
3.6
|
27.7
|
1.0
|
HA
|
B:TRP80
|
3.6
|
19.2
|
1.0
|
CG
|
B:GLN79
|
3.6
|
20.3
|
1.0
|
HG11
|
B:VAL86
|
3.7
|
22.8
|
1.0
|
NE2
|
B:GLN79
|
3.7
|
23.1
|
1.0
|
CG1
|
B:VAL86
|
3.7
|
19.0
|
1.0
|
CD
|
B:GLN79
|
3.8
|
22.4
|
1.0
|
HZN
|
C:K1N101
|
3.9
|
27.4
|
1.0
|
CD2
|
C:K1N101
|
3.9
|
21.8
|
1.0
|
CZ
|
C:K1N101
|
3.9
|
21.4
|
1.0
|
C
|
B:TRP80
|
4.0
|
16.7
|
1.0
|
CB
|
B:GLN79
|
4.0
|
17.9
|
1.0
|
O
|
B:TRP80
|
4.0
|
16.7
|
1.0
|
CD
|
B:ARG81
|
4.1
|
25.4
|
1.0
|
N
|
B:TRP80
|
4.1
|
15.6
|
1.0
|
CA
|
B:TRP80
|
4.1
|
16.0
|
1.0
|
HG12
|
B:VAL86
|
4.1
|
22.8
|
1.0
|
CAQ
|
C:K1N101
|
4.1
|
22.8
|
1.0
|
HB1
|
C:K1N101
|
4.1
|
24.0
|
1.0
|
HE22
|
B:GLN79
|
4.2
|
27.7
|
1.0
|
CB
|
B:ARG81
|
4.3
|
21.3
|
1.0
|
HH21
|
B:ARG81
|
4.3
|
30.5
|
1.0
|
H
|
B:TRP80
|
4.3
|
18.7
|
1.0
|
C
|
B:GLN79
|
4.3
|
16.6
|
1.0
|
HG2
|
B:ARG81
|
4.3
|
27.6
|
1.0
|
N
|
B:ARG81
|
4.4
|
18.3
|
1.0
|
CE2
|
C:K1N101
|
4.4
|
23.9
|
1.0
|
HB3
|
B:ASN71
|
4.4
|
22.5
|
1.0
|
HG2
|
B:GLN79
|
4.5
|
24.4
|
1.0
|
CG
|
B:ARG81
|
4.5
|
23.0
|
1.0
|
C
|
C:K1N101
|
4.5
|
23.3
|
1.0
|
OE1
|
B:GLN79
|
4.5
|
24.9
|
1.0
|
OAL
|
C:K1N101
|
4.5
|
40.2
|
1.0
|
N
|
C:K1N101
|
4.6
|
27.9
|
1.0
|
HD2
|
B:ARG81
|
4.6
|
30.5
|
1.0
|
O
|
B:GLN79
|
4.6
|
16.8
|
1.0
|
NAP
|
C:K1N101
|
4.6
|
21.8
|
1.0
|
HB2
|
B:ASN71
|
4.7
|
22.5
|
1.0
|
H
|
B:ARG81
|
4.7
|
21.9
|
1.0
|
HG21
|
B:VAL86
|
4.7
|
22.6
|
1.0
|
HB3
|
B:GLN79
|
4.8
|
21.5
|
1.0
|
NH2
|
B:ARG81
|
4.8
|
25.4
|
1.0
|
HD2
|
C:K1N101
|
4.8
|
26.1
|
1.0
|
HZ
|
C:K1N101
|
4.8
|
25.6
|
1.0
|
CA
|
B:GLN79
|
4.8
|
16.0
|
1.0
|
HD22
|
B:ASN71
|
4.9
|
28.2
|
1.0
|
CA
|
B:ARG81
|
4.9
|
20.4
|
1.0
|
NE
|
B:ARG81
|
4.9
|
24.4
|
1.0
|
CB
|
B:VAL86
|
5.0
|
17.1
|
1.0
|
HH2
|
B:TRP23
|
5.0
|
18.3
|
1.0
|
CAK
|
C:K1N101
|
5.0
|
35.5
|
1.0
|
HG23
|
B:VAL86
|
5.0
|
22.6
|
1.0
|
HB2
|
B:ARG81
|
5.0
|
25.6
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 6rd2
Go back to
Chlorine Binding Sites List in 6rd2
Chlorine binding site 2 out
of 2 in the Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Enah EVH1 in Complex with Ac-[2-Cl-F]-[Prom-2]-[Prom-1]-Tedel-NH2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl101
b:19.8
occ:1.00
|
CL1
|
D:K1N101
|
0.0
|
19.8
|
1.0
|
CD1
|
D:K1N101
|
1.8
|
17.6
|
1.0
|
CE1
|
D:K1N101
|
2.7
|
18.8
|
1.0
|
HB2
|
D:K1N101
|
2.7
|
23.3
|
1.0
|
CG
|
D:K1N101
|
2.7
|
18.0
|
1.0
|
HA
|
D:K1N101
|
2.8
|
24.3
|
1.0
|
HE1
|
D:K1N101
|
2.8
|
22.6
|
1.0
|
HG3
|
A:GLN79
|
2.9
|
21.8
|
1.0
|
HG13
|
A:VAL86
|
2.9
|
22.4
|
1.0
|
HAQ
|
D:K1N101
|
3.0
|
25.4
|
1.0
|
CB
|
D:K1N101
|
3.0
|
19.4
|
1.0
|
HG3
|
A:ARG81
|
3.2
|
29.6
|
1.0
|
CA
|
D:K1N101
|
3.4
|
20.3
|
1.0
|
HG11
|
A:VAL86
|
3.4
|
22.4
|
1.0
|
HB2
|
A:GLN79
|
3.5
|
20.4
|
1.0
|
CG1
|
A:VAL86
|
3.6
|
18.7
|
1.0
|
HG2
|
A:ARG81
|
3.6
|
29.6
|
1.0
|
HA
|
A:TRP80
|
3.6
|
19.1
|
1.0
|
CG
|
A:GLN79
|
3.6
|
18.2
|
1.0
|
HE21
|
A:GLN79
|
3.7
|
26.5
|
1.0
|
CD
|
A:GLN79
|
3.8
|
20.2
|
1.0
|
CG
|
A:ARG81
|
3.8
|
24.7
|
1.0
|
NE2
|
A:GLN79
|
3.8
|
22.1
|
1.0
|
CZ
|
D:K1N101
|
4.0
|
20.1
|
1.0
|
CD2
|
D:K1N101
|
4.0
|
19.4
|
1.0
|
CAQ
|
D:K1N101
|
4.0
|
21.2
|
1.0
|
HG12
|
A:VAL86
|
4.0
|
22.4
|
1.0
|
HD3
|
A:ARG81
|
4.0
|
30.2
|
1.0
|
OAL
|
D:K1N101
|
4.0
|
30.1
|
1.0
|
HB1
|
D:K1N101
|
4.1
|
23.3
|
1.0
|
HH21
|
A:ARG81
|
4.1
|
29.5
|
1.0
|
N
|
A:TRP80
|
4.1
|
15.4
|
1.0
|
CB
|
A:GLN79
|
4.1
|
17.0
|
1.0
|
CA
|
A:TRP80
|
4.1
|
15.9
|
1.0
|
C
|
A:TRP80
|
4.2
|
16.8
|
1.0
|
O
|
A:TRP80
|
4.2
|
16.9
|
1.0
|
HE22
|
A:GLN79
|
4.3
|
26.5
|
1.0
|
H
|
A:TRP80
|
4.3
|
18.5
|
1.0
|
HG23
|
A:VAL86
|
4.3
|
21.0
|
1.0
|
C
|
A:GLN79
|
4.3
|
15.8
|
1.0
|
HB3
|
A:ASN71
|
4.4
|
21.0
|
1.0
|
HZN
|
D:K1N101
|
4.4
|
25.4
|
1.0
|
OE1
|
A:GLN79
|
4.4
|
22.9
|
1.0
|
N
|
D:K1N101
|
4.4
|
20.3
|
1.0
|
HG2
|
A:GLN79
|
4.4
|
21.8
|
1.0
|
C
|
D:K1N101
|
4.4
|
22.0
|
1.0
|
CD
|
A:ARG81
|
4.5
|
25.2
|
1.0
|
CE2
|
D:K1N101
|
4.5
|
21.0
|
1.0
|
O
|
A:GLN79
|
4.6
|
16.0
|
1.0
|
NAP
|
D:K1N101
|
4.6
|
19.8
|
1.0
|
NH2
|
A:ARG81
|
4.6
|
24.6
|
1.0
|
N
|
A:ARG81
|
4.6
|
18.0
|
1.0
|
CAK
|
D:K1N101
|
4.7
|
24.9
|
1.0
|
HB2
|
A:ASN71
|
4.7
|
21.0
|
1.0
|
CB
|
A:VAL86
|
4.8
|
16.6
|
1.0
|
HZ
|
D:K1N101
|
4.8
|
24.2
|
1.0
|
HB3
|
A:GLN79
|
4.8
|
20.4
|
1.0
|
HD2
|
D:K1N101
|
4.9
|
23.3
|
1.0
|
HG21
|
A:VAL86
|
4.9
|
21.0
|
1.0
|
CG2
|
A:VAL86
|
4.9
|
17.5
|
1.0
|
CA
|
A:GLN79
|
4.9
|
14.7
|
1.0
|
HAR
|
D:K1N101
|
4.9
|
31.2
|
1.0
|
HD22
|
A:ASN71
|
4.9
|
25.5
|
1.0
|
H
|
A:ARG81
|
4.9
|
21.6
|
1.0
|
HH22
|
A:ARG81
|
4.9
|
29.5
|
1.0
|
|
Reference:
M.Barone,
M.Muller,
R.Opitz,
Y.Roske,
A.Soicke,
S.Chiha,
S.Klein,
H.G.Schmalz,
R.Kuhne.
Structure-Guided Inhibitor Against Ena/Vasp Abrogates Breast Cancer Invasion To Be Published.
Page generated: Mon Jul 29 14:26:46 2024
|